Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig169_2GOGO:0010033;GO:0019867;GO:0061024;response to organic substance; outer membrane; membrane organization;contig169CDS4741877+1
contig169_2IPRSCANIPR007543LptD, C-terminalcontig169CDS4741877+1
contig169_2PFAMPF04453LPS transport system Dcontig169CDS4741877+1
contig17_1EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MVA1@1224|Proteobacteria,2TSUS@28211|Alphaproteobacteria,43GVN@69277|PhyllobacteriaceaeKcontig17CDS3575-10
contig17_1KEGGK04761LysR family transcriptional regulator, hydrogen peroxide-inducible genes activatorcontig17CDS3575-10
contig17_1GOGO:0003700;GO:0006355;DNA-binding transcription factor activity; regulation of DNA-templated transcription;contig17CDS3575-10
contig17_1IPRSCANIPR000847Transcription regulator HTH, LysRcontig17CDS3575-10
contig17_1PFAMPF00126Bacterial regulatory helix-turn-helix protein, lysR familycontig17CDS3575-10
contig17_2EggNOGCOG0753@1|root,COG0753@2|Bacteria,1MUXZ@1224|Proteobacteria,2TSG9@28211|Alphaproteobacteria,43HK7@69277|PhyllobacteriaceaePcontig17CDS7222152+1
contig17_2KEGGK03781catalase [EC:1.11.1.6]contig17CDS7222152+1
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