Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00000010 | MHC CLASS I-RELATED |
| SKAU_T00000020 | TAPASIN |
| SKAU_T00000030 | DEATH DOMAIN-ASSOCIATED PROTEIN 6 DAXX |
| SKAU_T00000040 | |
| SKAU_T00000050 | AGAP004733-PA |
| SKAU_T00000060 | KINESIN-LIKE PROTEIN KLP-3 |
| SKAU_T00000070 | AGAP004733-PA |
| SKAU_T00000080 | |
| SKAU_T00000090 | |
| SKAU_T00000100 | |
| SKAU_T00000110 | PROLIFERATING CELL NUCLEAR ANTIGEN |
| SKAU_T00000120 | LEUCINE AMINOPEPTIDASE-RELATED |
| SKAU_T00000130 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| SKAU_T00000140 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| SKAU_T00000150 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00000160 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00000170 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| SKAU_T00000180 | IZUMO SPERM-EGG FUSION PROTEIN 1 |
| SKAU_T00000190 | NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 |
| SKAU_T00000200 | |
| SKAU_T00000210 | SYNAPTOBREVIN HOMOLOG YKT6 |
| SKAU_T00000220 | HEXOKINASE |
| SKAU_T00000230 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| SKAU_T00000240 | DNA POLYMERASE DELTA SUBUNIT 2 |
| SKAU_T00000250 | PROTEASE M14 CARBOXYPEPTIDASE |
| SKAU_T00000260 | ENGULFMENT AND CELL MOTILITY |
| SKAU_T00000270 | |
| SKAU_T00000280 | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 |
| SKAU_T00000290 | STEROIDOGENIC ACUTE REGULATORY PROTEIN, MITOCHONDRIAL |
| SKAU_T00000300 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00000310 | LSM1 |
| SKAU_T00000320 | BCL2-ASSOCIATED ATHANOGENE |
| SKAU_T00000330 | AGAP008228-PA |
| SKAU_T00000340 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| SKAU_T00000350 | RING ZINC FINGER PROTEIN |
| SKAU_T00000360 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
| SKAU_T00000370 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
| SKAU_T00000380 | TELO2-INTERACTING PROTEIN 2 |
| SKAU_T00000390 | - |
| SKAU_T00000400 | DICKKOPF3-LIKE 3 |
| SKAU_T00000410 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| SKAU_T00000420 | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN |
| SKAU_T00000430 | 2-OXOGLUTARATE DEHYDROGENASE |
| SKAU_T00000440 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| SKAU_T00000450 | |
| SKAU_T00000460 | |
| SKAU_T00000470 | HEPARAN SULFATE SULFOTRANSFERASE |
| SKAU_T00000480 | MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN |
| SKAU_T00000490 | HISTONE H2A |
| SKAU_T00000500 | PUR-TRANSCRIPTIONAL ACTIVATOR |
