About Alvinactis idsseensis sp. Nov.

The vent sea anemoneAlvinactis idsseensis sp. Nov. is a species in the family Actinoscyphiidae. They can flourish in a variety of deep-sea environments. Most sea anemones thriving in sulfide-rich hydrothermal vent peripheral zone obtain nutrients by eating blind shrimp, rather than relying on chemoautotrophic carbon production.

Classification

Animalia Kingdom; Cnidaria (Phylum); Anthozoa (Class); Actiniaria (Order); Actinoscyphiidae (Family); Alvinactis (Genus); Alvinactis idsseensis sp. Nov. (Species)

Original Name

Alvinactis sp. ZX-2022


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Alvinactis idsseensis sp. Nov.CnidariaAlvinactis spDeep sea3,279Southwest Indian Ocean “Edmond” hydrothermal vent filed in the CIR (69 59′E, 23 87′S)2978091

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-456.58MbChromosome2023-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA90986492.80 27,561/1,71538.8463.2731,960

References
TitleJournalPubmed ID
Genetic adaptations of sea anemone to hydrothermal environmentScience Advances37862424

Gene Information

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Gene IDDescription
alvinactis_v1_g1SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
alvinactis_v1_g10INTEGRIN BETA SUBUNIT
alvinactis_v1_g100HEAT SHOCK PROTEIN 70KDA
alvinactis_v1_g1000BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN
alvinactis_v1_g10000UNCHARACTERIZED
alvinactis_v1_g10001SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
alvinactis_v1_g10002DIACYLGLYCEROL KINASE
alvinactis_v1_g10003-
alvinactis_v1_g10004ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100
alvinactis_v1_g10005SUGAR KINASE
alvinactis_v1_g10006-
alvinactis_v1_g10007MONOCARBOXYLATE TRANSPORTER
alvinactis_v1_g10008MONOCARBOXYLATE TRANSPORTER
alvinactis_v1_g10009MONOCARBOXYLATE TRANSPORTER
alvinactis_v1_g1001ACYL-COA-BINDING PROTEIN, ACBP
alvinactis_v1_g10010-
alvinactis_v1_g10011-
alvinactis_v1_g10012S-FORMYLGLUTATHIONE HYDROLASE
alvinactis_v1_g10013RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
alvinactis_v1_g10014SOX TRANSCRIPTION FACTOR

Results of comparison between Alvinactis idsseensis sp. Nov. and its nearshore relatives from the paper (Zhou et al., 2023)

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Annotation IDDescriptionTypeSubtypeGeneRatioEvolution TypeP-valueQ-value
ko05231Choline metabolism in cancerKEGG--expanded1.22E-074.10E-05
ko04270Vascular smooth muscle contractionKEGG--expanded1.86E-076.26E-05
ko00140Steroid hormone biosynthesisKEGG--expanded1.33E-060.000448
ko02010ABC transportersKEGG--expanded1.51E-060.000509
ko01523Antifolate resistanceKEGG--expanded1.26E-050.004246
ko00830Retinol metabolismKEGG--expanded2.47E-050.008325
ko05033Nicotine addictionKEGG--expanded5.31E-050.017884
ko00590Arachidonic acid metabolismKEGG--expanded6.41E-050.021605
ko04024cAMP signaling pathwayKEGG--expanded7.14E-050.024069
GO:0004325ferrochelatase activityGOMolecular Function-positive selection3.32E-070.000439616
GO:0004334fumarylacetoacetase activityGOMolecular Function-positive selection3.32E-070.000439616
GO:0004411homogentisate 1,2-dioxygenase activityGOMolecular Function-positive selection3.32E-070.000439616
GO:0004781sulfate adenylyltransferase (ATP) activityGOMolecular Function-positive selection3.32E-070.000439616
GO:0006559L-phenylalanine catabolic processGOBiological Process-positive selection3.32E-070.000439616
GO:0006570tyrosine metabolic processGOBiological Process-positive selection3.32E-070.000439616
GO:0006783heme biosynthetic processGOBiological Process-positive selection3.32E-070.000439616
GO:0006355regulation of transcription, DNA-templatedGOBiological Process-positive selection2.22E-050.029407526
GO:0000774adenyl-nucleotide exchange factor activityGOMolecular Function-positive selection3.65E-050.04838753
GO:0030896checkpoint clamp complexGOCellular Component-positive selection3.65E-050.04838753
GO:0031124mRNA 3'-end processingGOBiological Process-positive selection3.65E-050.04838753
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