About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g14318
Chiridota_g14319SPHINGOMYELINASE FAMILY MEMBER
Chiridota_g1432
Chiridota_g14320ER MEMBRANE PROTEIN COMPLEX
Chiridota_g14321
Chiridota_g14322TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Chiridota_g14323ACROSIN-RELATED
Chiridota_g14324DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN
Chiridota_g14325SERINE/THREONINE-PROTEIN KINASE
Chiridota_g14326
Chiridota_g14327
Chiridota_g14328UNCHARACTERIZED
Chiridota_g14329
Chiridota_g1433DNA LIGASE
Chiridota_g14330POLYCYSTIN-1
Chiridota_g14331POLYCYSTIN FAMILY MEMBER
Chiridota_g14332DNAJ-LIKE-2, ISOFORM A-RELATED
Chiridota_g14333
Chiridota_g14334N-MYC DOWNSTREAM REGULATED
Chiridota_g14335
Chiridota_g14336-
Chiridota_g14337
Chiridota_g14338
Chiridota_g14339EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
Chiridota_g1434
Chiridota_g14340
Chiridota_g14341ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g14342SPIRE
Chiridota_g14343
Chiridota_g14344SYNTAXIN
Chiridota_g14345
Chiridota_g14346
Chiridota_g14347REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g14348
Chiridota_g14349IP01015P-RELATED
Chiridota_g1435
Chiridota_g14350
Chiridota_g14351CAMK FAMILY PROTEIN KINASE
Chiridota_g14352DOCKING PROTEIN RELATED
Chiridota_g14353
Chiridota_g14354
Chiridota_g14355ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g14356
Chiridota_g14357
Chiridota_g14358MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Chiridota_g14359
Chiridota_g1436TRANSAMIDASE
Chiridota_g14360DYNEIN LIGHT INTERMEDIATE CHAIN
Chiridota_g14361PEFLIN
Chiridota_g14362MUCIN 4-RELATED
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