Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00046510 | ATP-BINDING CASSETTE SUB-FAMILY C |
| SKAU_T00046520 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00046530 | HAD SUPERFAMILY MEMBERS CMAS AND KDSC |
| SKAU_T00046540 | SHISA |
| SKAU_T00046550 | |
| SKAU_T00046560 | PARVIN |
| SKAU_T00046570 | PARVIN |
| SKAU_T00046580 | SARCOMA ANTIGEN NY-SAR-95-RELATED |
| SKAU_T00046590 | DYSTROGLYCAN-RELATED |
| SKAU_T00046600 | MIR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00046610 | RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN |
| SKAU_T00046620 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00046630 | |
| SKAU_T00046640 | |
| SKAU_T00046650 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00046660 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| SKAU_T00046670 | CALCIUM BINDING PROTEINS |
| SKAU_T00046680 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
| SKAU_T00046690 | NADH-CYTOCHROME B5 REDUCTASE |
| SKAU_T00046700 | |
| SKAU_T00046710 | |
| SKAU_T00046720 | DEOXYRIBONUCLEASE II |
| SKAU_T00046730 | NEL HOMOLOG |
| SKAU_T00046740 | C-REACTIVE PROTEIN-RELATED |
| SKAU_T00046750 | SEMAPHORIN |
| SKAU_T00046760 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
| SKAU_T00046770 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00046780 | SEMAPHORIN |
| SKAU_T00046790 | NUCLEAR FRAGILE X MENTAL RETARDATION-INTERACTING PROTEIN 2 |
| SKAU_T00046800 | MEMBRANE PROTEIN MLC1 |
| SKAU_T00046810 | TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE |
| SKAU_T00046820 | AP ENDONUCLEASE |
| SKAU_T00046830 | |
| SKAU_T00046840 | PANNEXIN |
| SKAU_T00046850 | |
| SKAU_T00046860 | PHEROMONE SHUTDOWN PROTEIN |
| SKAU_T00046870 | SELENOPROTEIN O |
| SKAU_T00046880 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00046890 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00046900 | |
| SKAU_T00046910 | RNA BINDING PROTEIN |
| SKAU_T00046920 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| SKAU_T00046930 | |
| SKAU_T00046940 | PHOSPHOGLYCERATE MUTASE |
| SKAU_T00046950 | CALDESMON |
| SKAU_T00046960 | TROPONIN T |
| SKAU_T00046970 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA |
| SKAU_T00046980 | |
| SKAU_T00046990 | PROTEIN SIDEKICK |
| SKAU_T00047000 | PROTEIN SIDEKICK |
