About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 888 889 890 891 892 893 894 895 896 897 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2176454.1NUCLEOSIDE DIPHOSPHATE KINASE 7
KAK2176455.1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
KAK2176456.1SI:CH211-189E2.2
KAK2176457.1-
KAK2176458.1POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
KAK2176459.1-
KAK2176411.1T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED
KAK2176412.1PROTEIN FAM183B
KAK2176413.1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
KAK2176414.1PROTEIN FAM183B
KAK2176415.1RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED
KAK2176416.1RHO GTPASE-ACTIVATING PROTEIN 100F
KAK2176417.1RHO GTPASE-ACTIVATING PROTEIN 100F
KAK2176418.1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
KAK2176419.1-
KAK2176420.1-
KAK2176421.1-
KAK2176422.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
KAK2176423.1BUCENTAUR RELATED
KAK2176424.1INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG
TOP