Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00042010 | |
| SKAU_T00042020 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| SKAU_T00042030 | DEOXYRIBOSE-PHOSPHATE ALDOLASE |
| SKAU_T00042040 | |
| SKAU_T00042050 | |
| SKAU_T00042060 | HIGH MOBILITY GROUP PROTEINS HMG-A AND C |
| SKAU_T00042070 | METHIONINE SULFOXIDE REDUCTASE |
| SKAU_T00042080 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| SKAU_T00042090 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| SKAU_T00042100 | BAX INHIBITOR-RELATED |
| SKAU_T00042110 | MHC CLASS II-RELATED |
| SKAU_T00042120 | OS01G0253100 PROTEIN |
| SKAU_T00042130 | RFX TRANSCRIPTION FACTOR FAMILY |
| SKAU_T00042140 | SYNEMBRYN |
| SKAU_T00042150 | TROPONIN T |
| SKAU_T00042160 | TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL |
| SKAU_T00042170 | CRYPTOCHROME |
| SKAU_T00042180 | ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING |
| SKAU_T00042190 | ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING |
| SKAU_T00042200 | UNCHARACTERIZED |
| SKAU_T00042210 | CGI-41 METHYLTRANSFERASE |
| SKAU_T00042220 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 |
| SKAU_T00042230 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 |
| SKAU_T00042240 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00042250 | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00042260 | |
| SKAU_T00042270 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00042280 | |
| SKAU_T00042290 | |
| SKAU_T00042300 | |
| SKAU_T00042310 | |
| SKAU_T00042320 | |
| SKAU_T00042330 | DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41 |
| SKAU_T00042340 | |
| SKAU_T00042350 | |
| SKAU_T00042360 | |
| SKAU_T00042370 | DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41 |
| SKAU_T00042380 | SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED |
| SKAU_T00042390 | ALDEHYDE DEHYDROGENASE-RELATED |
| SKAU_T00042400 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER |
| SKAU_T00042410 | ACYL-COENZYME A THIOESTERASE-RELATED |
| SKAU_T00042420 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| SKAU_T00042430 | |
| SKAU_T00042440 | |
| SKAU_T00042450 | NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT |
| SKAU_T00042460 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00042470 | |
| SKAU_T00042480 | |
| SKAU_T00042490 | |
| SKAU_T00042500 |
