About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 835 836 837 838 839 840 841 842 843 844 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2177486.1R3H DOMAIN-CONTAINING PROTEIN 4
KAK2177487.1UNCHARACTERIZED
KAK2177488.1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT
KAK2177489.1C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
KAK2177490.1-
KAK2177491.1TETRATRICOPEPTIDE REPEAT PROTEIN 14
KAK2177492.1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
KAK2177493.1-
KAK2177494.1-
KAK2177495.1BUCENTAUR RELATED
KAK2177496.1-
KAK2177497.1PROTEIN CBG26694
KAK2177498.1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
KAK2177499.1-
KAK2177500.1-
KAK2177477.1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
KAK2177478.1GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
KAK2177479.1PROTEASE M1 ZINC METALLOPROTEASE
KAK2177480.1FRIZZLED
KAK2177481.1-
TOP