Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000015802.1 | ENOYL-COA HYDRATASE |
| ENSQHTP00000015803.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| ENSQHTP00000015804.1 | E3 UBIQUITIN-PROTEIN LIGASE TRAIP |
| ENSQHTP00000015805.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| ENSQHTP00000015806.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| ENSQHTP00000015807.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000015808.1 | AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN |
| ENSQHTP00000015809.1 | TRANSPOSON |
| ENSQHTP00000015810.1 | RAS-RELATED PROTEIN RAB |
| ENSQHTP00000015811.1 | - |
| ENSQHTP00000015812.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| ENSQHTP00000015813.1 | E3 UBIQUITIN-PROTEIN LIGASE TRAIP |
| ENSQHTP00000015814.1 | HEXOKINASE |
| ENSQHTP00000015815.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| ENSQHTP00000015816.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| ENSQHTP00000015817.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000015818.1 | RAS-RELATED PROTEIN RAB |
| ENSQHTP00000015819.1 | ANKYRIN REPEAT PROTEIN |
| ENSQHTP00000015820.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| ENSQHTP00000015821.1 | HEXOKINASE |
