Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00036510 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00036520 | NUCLEAR-INTERACTING PARTNER OF ALK |
| SKAU_T00036530 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| SKAU_T00036540 | VACUOLAR CALCIUM ION TRANSPORTER |
| SKAU_T00036550 | FRIZZLED |
| SKAU_T00036560 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| SKAU_T00036570 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| SKAU_T00036580 | |
| SKAU_T00036590 | FATTY ACID BINDING PROTEIN |
| SKAU_T00036600 | UBIQUITIN SPECIFIC PROTEINASE |
| SKAU_T00036610 | MYOZENIN |
| SKAU_T00036620 | PUTATIVE-RELATED |
| SKAU_T00036630 | SEC24-RELATED PROTEIN |
| SKAU_T00036640 | CALCIUM BINDING PROTEINS |
| SKAU_T00036650 | |
| SKAU_T00036660 | |
| SKAU_T00036670 | |
| SKAU_T00036680 | |
| SKAU_T00036690 | |
| SKAU_T00036700 | |
| SKAU_T00036710 | |
| SKAU_T00036720 | |
| SKAU_T00036730 | |
| SKAU_T00036740 | |
| SKAU_T00036750 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| SKAU_T00036760 | |
| SKAU_T00036770 | CASPASE ACTIVITY AND APOPTOSIS INHIBITOR 1 |
| SKAU_T00036780 | TRANSLATIONAL ACTIVATOR GCN1-RELATED |
| SKAU_T00036790 | LYSINE-SPECIFIC DEMETHYLASE |
| SKAU_T00036800 | RETROTRANSPOSON |
| SKAU_T00036810 | CYTOKINE RECEPTOR |
| SKAU_T00036820 | |
| SKAU_T00036830 | |
| SKAU_T00036840 | |
| SKAU_T00036850 | |
| SKAU_T00036860 | |
| SKAU_T00036870 | |
| SKAU_T00036880 | |
| SKAU_T00036890 | |
| SKAU_T00036900 | |
| SKAU_T00036910 | |
| SKAU_T00036920 | YALI0A06105P |
| SKAU_T00036930 | |
| SKAU_T00036940 | TYROSINASE FAMILY MEMBER |
| SKAU_T00036950 | - |
| SKAU_T00036960 | MULTIPLE PDZ DOMAIN PROTEIN |
| SKAU_T00036970 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00036980 | |
| SKAU_T00036990 | |
| SKAU_T00037000 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
