Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00366010 | |
| SKAU_T00366020 | BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 FAMILY MEMBER |
| SKAU_T00366030 | |
| SKAU_T00366040 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| SKAU_T00366050 | RING ZINC FINGER PROTEIN |
| SKAU_T00366060 | INTERLEUKIN-12 SUBUNIT BETA-RELATED |
| SKAU_T00366070 | UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED |
| SKAU_T00366080 | |
| SKAU_T00366090 | |
| SKAU_T00366100 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| SKAU_T00366110 | MENIN |
| SKAU_T00366120 | RETICULON-LIKE PROTEIN |
| SKAU_T00366130 | SIMILAR TO RIKEN CDNA 2700081O15 |
| SKAU_T00366140 | |
| SKAU_T00366150 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| SKAU_T00366160 | CCCH ZINC FINGER/TIS11-RELATED |
| SKAU_T00366170 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
| SKAU_T00366180 | POTASSIUM CHANNEL, SUBFAMILY K |
| SKAU_T00366190 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| SKAU_T00366200 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| SKAU_T00366210 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00366220 | RAS-RELATED PROTEIN RAB |
| SKAU_T00366230 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00366240 | |
| SKAU_T00366250 | |
| SKAU_T00366260 | |
| SKAU_T00366270 | PROTEIN SEL-1 HOMOLOG 3 |
| SKAU_T00366280 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| SKAU_T00366290 | |
| SKAU_T00366300 | LYSINE-SPECIFIC DEMETHYLASE |
| SKAU_T00366310 | SH3 DOMAIN AND TETRATRICOPEPTIDE REPEATS CONTAINING PROTEIN |
| SKAU_T00366320 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| SKAU_T00366330 | GRPE PROTEIN |
| SKAU_T00366340 | SECURIN-3 |
| SKAU_T00366350 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| SKAU_T00366360 | TYROSINE-PROTEIN KINASE |
| SKAU_T00366370 | T-CELL IMMUNOGLOBULIN AND MUCIN DOMAIN CONTAINING TIM |
| SKAU_T00366380 | RING FINGER PROTEIN 127 |
| SKAU_T00366390 | |
| SKAU_T00366400 | |
| SKAU_T00366410 | |
| SKAU_T00366420 | HYALURONAN MEDIATED MOTILITY RECEPTOR |
| SKAU_T00366430 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00366440 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| SKAU_T00366450 | FORKHEAD BOX PROTEIN |
| SKAU_T00366460 | |
| SKAU_T00366470 | WNT RELATED |
| SKAU_T00366480 | WNT RELATED |
| SKAU_T00366490 | |
| SKAU_T00366500 | SI:DKEY-29D5.2 |
