The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032903671.1 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |
| XP_032903672.1 | ZINC FINGER PROTEIN |
| XP_032903673.1 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |
| XP_032903674.1 | NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE |
| XP_032903675.1 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
| XP_032903676.1 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |
| XP_032903677.1 | |
| XP_032903678.1 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY N MEMBER 1 |
| XP_032903679.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5B2-RELATED |
| XP_032903680.1 | TRYPSIN-RELATED |
| XP_032903681.1 | TRYPSIN-RELATED |
| XP_032903682.1 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10 |
| XP_032903683.1 | INACTIVE POLYGLYCYLASE TTLL10 |
| XP_032903684.1 | INACTIVE POLYGLYCYLASE TTLL10 |
| XP_032903685.1 | INACTIVE POLYGLYCYLASE TTLL10 |
| XP_032903686.1 | INACTIVE POLYGLYCYLASE TTLL10 |
| XP_032903687.1 | GUANYLIN FAMILY MEMBER |
| XP_032903688.1 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
| XP_032903689.1 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP |
| XP_032903690.1 | CHROMOBOX PROTEIN |
| XP_032903691.1 | WD REPEAT PROTEIN 8-RELATED |
| XP_032903692.1 | WD REPEAT PROTEIN 8-RELATED |
| XP_032903693.1 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
| XP_032903694.1 | SCAVENGER RECEPTOR CLASS F |
| XP_032903695.1 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
| XP_032903696.1 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
| XP_032903697.1 | CHROMOBOX PROTEIN |
| XP_032903698.1 | |
| XP_032903699.1 | CALCIUM-SENSING RECEPTOR-RELATED |
| XP_032903700.1 | CALCIUM-SENSING RECEPTOR-RELATED |
| XP_032903701.1 | CALCIUM-SENSING RECEPTOR-RELATED |
| XP_032903702.1 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 25 |
| XP_032903703.1 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5 |
| XP_032903704.1 | RETICULOCALBIN |
| XP_032903705.1 | FIBRONECTIN TYPE III DOMAIN-CONTAINING PROTEIN 10 |
| XP_032903706.1 | TASTE RECEPTOR TYPE 2 |
| XP_032903707.1 | TASTE RECEPTOR TYPE 2 |
| XP_032903708.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032903709.1 | E3 UBIQUITIN-PROTEIN LIGASE RNF182 |
| XP_032903710.1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| XP_032903711.1 | |
| XP_032903712.1 | PEPTIDYLARGININE DEIMINASE |
| XP_032903713.1 | FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED |
| XP_032903714.1 | CELL ADHESION MOLECULE |
| XP_032903715.1 | UNCHARACTERIZED |
| XP_032903716.1 | PKSB |
| XP_032903717.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| XP_032903718.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| XP_032903719.1 | C5ORF31 |
| XP_032903720.1 | COLD SHOCK DOMAIN CONTAINING PROTEINS |
