Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00344010 | DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4 |
| SKAU_T00344020 | |
| SKAU_T00344030 | HISTONE H2A |
| SKAU_T00344040 | AHD DOMAIN-CONTAINING PROTEIN |
| SKAU_T00344050 | |
| SKAU_T00344060 | |
| SKAU_T00344070 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| SKAU_T00344080 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| SKAU_T00344090 | OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC |
| SKAU_T00344100 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
| SKAU_T00344110 | SI:CH211-266K2.1 |
| SKAU_T00344120 | SI:CH211-266K2.1 |
| SKAU_T00344130 | B-BOX DOMAIN CONTAINING |
| SKAU_T00344140 | N-ACETYLNEURAMINATE SYNTHASE |
| SKAU_T00344150 | CLATHRIN LIGHT CHAIN |
| SKAU_T00344160 | ROK (REPRESSOR, ORF, KINASE) FAMILY |
| SKAU_T00344170 | |
| SKAU_T00344180 | COMPLEXIN |
| SKAU_T00344190 | POLYCOMB GROUP RING FINGER PROTEIN |
| SKAU_T00344200 | |
| SKAU_T00344210 | DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS |
| SKAU_T00344220 | CAP BINDING PROTEIN |
| SKAU_T00344230 | HOMEODOMAIN-ONLY PROTEIN |
| SKAU_T00344240 | MEDIATOR COMPLEX SUBUNIT 28 |
| SKAU_T00344250 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
| SKAU_T00344260 | PROTEIN TAG-278-RELATED |
| SKAU_T00344270 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| SKAU_T00344280 | TRANSCRIPTION FACTOR MLR1/2 |
| SKAU_T00344290 | TRANSCRIPTION FACTOR MLR1/2 |
| SKAU_T00344300 | |
| SKAU_T00344310 | |
| SKAU_T00344320 | |
| SKAU_T00344330 | |
| SKAU_T00344340 | MHC CLASS I-RELATED |
| SKAU_T00344350 | MHC CLASS I-RELATED |
| SKAU_T00344360 | ATF6, ISOFORM C |
| SKAU_T00344370 | |
| SKAU_T00344380 | |
| SKAU_T00344390 | |
| SKAU_T00344400 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00344410 | |
| SKAU_T00344420 | |
| SKAU_T00344430 | |
| SKAU_T00344440 | APRATAXIN-RELATED |
| SKAU_T00344450 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| SKAU_T00344460 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 1 |
| SKAU_T00344470 | |
| SKAU_T00344480 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 1 |
| SKAU_T00344490 | |
| SKAU_T00344500 | DENN DOMAIN-CONTAINING PROTEIN 4 |
