About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Perciformes (Order); Cottoidei (Suborder); Liparidae (Family); Pseudoliparis (Genus); Pseudoliparis swirei (Species)

Original Name

Pseudoliparis swirei Gerringer & Linley, 2017

Key Reference Paper

1. Gerringer M E, Linley T D, Jamieson A J, et al. Pseudoliparis swirei sp. nov.: a newly-discovered hadal snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench[J]. Zootaxa, 2017, 4358(1): 161–177-161–177. (Gerringer et al., 2017)

Description

Holotype is immature. Ripe females had eggs up to 9.4 mm diameter, among the largest teleost eggs recorded, 0.4 mm smaller than the largest record. The eggs were unsorted within gonad, with the largest eggs free and interspersed within a matrix of smaller eggs. No developmental structures were visible within even the largest eggs. Two distinct size classes of eggs present with up to 23 large eggs (>5 mm) and up to 851 small eggs of less than half the diameter of the larger size class. There were rarely intermediate stages (Figure 7). Individuals with only small eggs had maximum egg sizes ranging from 0.7 to 1.4 mm. Genital papilla visible in freshly collected males, oriented anteriorly

Etymology

The Mariana Trench famously houses the ocean’s deepest point, at Challenger Deep, named for the HMS Challenger expedition which discovered the trench in 1875. Their deepest sounding of 8,184 m, then the greatest known ocean depth, was christened Swire Deep after Herbert Swire, the ship’s First Navigating Sublieutenant (Corfield 2003). We name this fish in his honor, in acknowledgment and gratitude of the crew members that have supported oceanographic research throughout history

Distribution

Known only from the Mariana Trench at capture depths from 6,898–7,966 m, individuals likely this species were recognized in video at depths 6,198–8,098 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-684Mbscaffold2019--PRJNA47284691.70 25,738/4,21944-25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka13621RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Tanaka13622PHOSPHOMANNOMUTASE 45A
Tanaka13623ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Tanaka13624PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Tanaka13625MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Tanaka13626D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Tanaka13627RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Tanaka13628DNA POLYMERASE I
Tanaka13629UBIQUITIN-ACTIVATING ENZYME E1
Tanaka136302-HYDROXYACID DEHYDROGENASE-RELATED
Tanaka13631ZINC FINGER PROTEIN
Tanaka13632DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49
Tanaka13633F-BOX ONLY PROTEIN
Tanaka13634ANKYRIN REPEAT-CONTAINING
Tanaka13635-
Tanaka13636HISTONE PARYLATION FACTOR 1
Tanaka13637CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Tanaka13638PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B
Tanaka13639WOLFRAMIN
Tanaka13640HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER
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