Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000013542.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| ENSQHTP00000013543.1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| ENSQHTP00000013544.1 | ZINC FINGER PROTEIN |
| ENSQHTP00000013545.1 | PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED |
| ENSQHTP00000013546.1 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT |
| ENSQHTP00000013547.1 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
| ENSQHTP00000013548.1 | REGULATOR OF G-PROTEIN SIGNALING 22 |
| ENSQHTP00000013549.1 | BONUS, ISOFORM C-RELATED |
| ENSQHTP00000013550.1 | ZINC FINGER PROTEIN |
| ENSQHTP00000013551.1 | - |
| ENSQHTP00000013552.1 | - |
| ENSQHTP00000013553.1 | 2-OXOGLUTARATE DEHYDROGENASE |
| ENSQHTP00000013554.1 | PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED |
| ENSQHTP00000013555.1 | WNT RELATED |
| ENSQHTP00000013556.1 | NUCLEAR HORMONE RECEPTOR |
| ENSQHTP00000013557.1 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT |
| ENSQHTP00000013558.1 | INTERLEUKIN-1 RECEPTOR FAMILY MEMBER |
| ENSQHTP00000013559.1 | - |
| ENSQHTP00000013560.1 | - |
| ENSQHTP00000013561.1 | HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 |
