Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000013262.1 | PROTEIN TRANSPORT PROTEIN SEC23 |
| ENSQHTP00000013263.1 | 60S RIBOSOMAL PROTEIN L22 |
| ENSQHTP00000013264.1 | PYRIDOXINE-5-PHOSPHATE OXIDASE |
| ENSQHTP00000013265.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| ENSQHTP00000013266.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| ENSQHTP00000013267.1 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
| ENSQHTP00000013268.1 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
| ENSQHTP00000013269.1 | UNCHARACTERIZED |
| ENSQHTP00000013270.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| ENSQHTP00000013271.1 | NISCHARIN RELATED |
| ENSQHTP00000013272.1 | 60S RIBOSOMAL PROTEIN L22 |
| ENSQHTP00000013273.1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| ENSQHTP00000013274.1 | PROTEIN TRANSPORT PROTEIN SEC23 |
| ENSQHTP00000013275.1 | - |
| ENSQHTP00000013276.1 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
| ENSQHTP00000013277.1 | - |
| ENSQHTP00000013278.1 | UNCHARACTERIZED |
| ENSQHTP00000013279.1 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| ENSQHTP00000013280.1 | UNCHARACTERIZED |
| ENSQHTP00000013281.1 | - |
