Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00328510 | OPTICIN |
| SKAU_T00328520 | OXYGENASE-RELATED |
| SKAU_T00328530 | DNA-DIRECTED RNA POLYMERASE I,II,III |
| SKAU_T00328540 | SH3 MULTIPLE DOMAIN |
| SKAU_T00328550 | RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN |
| SKAU_T00328560 | CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE |
| SKAU_T00328570 | PROTEIN EURL HOMOLOG |
| SKAU_T00328580 | B-CELL TRANSLOCATION GENE |
| SKAU_T00328590 | |
| SKAU_T00328600 | |
| SKAU_T00328610 | |
| SKAU_T00328620 | |
| SKAU_T00328630 | COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR-RELATED |
| SKAU_T00328640 | COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR-RELATED |
| SKAU_T00328650 | FIBROSIN FAMILY MEMBER |
| SKAU_T00328660 | |
| SKAU_T00328670 | PROTEIN PHOSPHATASE |
| SKAU_T00328680 | |
| SKAU_T00328690 | |
| SKAU_T00328700 | |
| SKAU_T00328710 | E3 UBIQUITIN-PROTEIN LIGASE TRIM37 |
| SKAU_T00328720 | RAB GDP/GTP EXCHANGE FACTOR |
| SKAU_T00328730 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00328740 | |
| SKAU_T00328750 | SYNTAXIN |
| SKAU_T00328760 | |
| SKAU_T00328770 | SH2B ADAPTER PROTEIN |
| SKAU_T00328780 | CCAAT DISPLACEMENT PROTEIN-RELATED |
| SKAU_T00328790 | |
| SKAU_T00328800 | CARBONIC ANHYDRASE |
| SKAU_T00328810 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| SKAU_T00328820 | |
| SKAU_T00328830 | REST COREPRESSOR COREST PROTEIN-RELATED |
| SKAU_T00328840 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00328850 | |
| SKAU_T00328860 | |
| SKAU_T00328870 | ZINC FINGER PROTEIN |
| SKAU_T00328880 | INSULIN RECEPTOR SUBSTRATE |
| SKAU_T00328890 | INSULIN RECEPTOR SUBSTRATE |
| SKAU_T00328900 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00328910 | SEGMENT POLARITY PROTEIN DISHEVELLED |
| SKAU_T00328920 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00328930 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
| SKAU_T00328940 | SI:DKEY-19B23.12-RELATED |
| SKAU_T00328950 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| SKAU_T00328960 | DIAMINE N-ACETYLTRANSFERASE |
| SKAU_T00328970 | DIAMINE N-ACETYLTRANSFERASE |
| SKAU_T00328980 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| SKAU_T00328990 | CLAUDIN |
| SKAU_T00329000 | SI:DKEY-19B23.11-RELATED |
