The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032900371.1 | DNAJ HOMOLOG SUBFAMILY B MEMBER 2 |
| XP_032900372.1 | PEPTIDE CHAIN RELEASE FACTOR |
| XP_032900373.1 | PROTEIN HID1 |
| XP_032900374.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| XP_032900375.1 | UPF0472 PROTEIN C16ORF72 |
| XP_032900376.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032900377.1 | - |
| XP_032900378.1 | - |
| XP_032900379.1 | DNAJ HOMOLOG SUBFAMILY B MEMBER 2 |
| XP_032900380.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| XP_032900381.1 | RNA-BINDING PROTEIN |
| XP_032900382.1 | RNA-BINDING PROTEIN |
| XP_032900383.1 | RNA-BINDING PROTEIN |
| XP_032900384.1 | RNA-BINDING PROTEIN |
| XP_032900385.1 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| XP_032900386.1 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| XP_032900387.1 | DNAJ HOMOLOG SUBFAMILY B MEMBER 2 |
| XP_032900388.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900389.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900390.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900391.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900392.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900393.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032900394.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| XP_032900395.1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| XP_032900396.1 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
| XP_032900397.1 | DNAJ HOMOLOG SUBFAMILY B MEMBER 2 |
| XP_032900398.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| XP_032900399.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| XP_032900400.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| XP_032900401.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032900402.1 | UNCHARACTERIZED |
| XP_032900403.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032900404.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032900405.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032900406.1 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
| XP_032900407.1 | GTP-BINDING |
| XP_032900408.1 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
| XP_032900409.1 | B-BOX DOMAIN CONTAINING |
| XP_032900410.1 | B-BOX DOMAIN CONTAINING |
| XP_032900411.1 | B-BOX DOMAIN CONTAINING |
| XP_032900412.1 | B-BOX DOMAIN CONTAINING |
| XP_032900413.1 | B-BOX DOMAIN CONTAINING |
| XP_032900414.1 | B-BOX DOMAIN CONTAINING |
| XP_032900415.1 | B-BOX DOMAIN CONTAINING |
| XP_032900416.1 | IA-2 PROTEIN TYROSINE PHOSPHATASE, ISOFORM C |
| XP_032900417.1 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| XP_032900418.1 | FAS-BINDING FACTOR 1 |
| XP_032900419.1 | FAS-BINDING FACTOR 1 |
| XP_032900420.1 | FAS-BINDING FACTOR 1 |
