About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g9879EXPRESSED PROTEIN
Chiridota_g988ALPHA- 1,3 -FUCOSYLTRANSFERASE
Chiridota_g9880PEROXISOMAL BIOGENESIS FACTOR 3
Chiridota_g9881SERINE/THREONINE-PROTEIN KINASE RIO1
Chiridota_g9882NETRIN/LAMININ-RELATED
Chiridota_g9883
Chiridota_g9884
Chiridota_g9885LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN
Chiridota_g9886
Chiridota_g9887
Chiridota_g9888
Chiridota_g9889
Chiridota_g989ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK
Chiridota_g9890-
Chiridota_g9891
Chiridota_g9892
Chiridota_g9893
Chiridota_g9894
Chiridota_g9895ZINC FINGER PROTEIN
Chiridota_g9896RIBONUCLEASE H1
Chiridota_g9897
Chiridota_g9898
Chiridota_g9899
Chiridota_g99BAX INHIBITOR-RELATED
Chiridota_g990
Chiridota_g9900
Chiridota_g9901PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
Chiridota_g9902
Chiridota_g9903
Chiridota_g9904SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
Chiridota_g9905IMPORTIN BETA
Chiridota_g9906DNAJ HOMOLOG SUBFAMILY C MEMBER 7
Chiridota_g9907CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG
Chiridota_g9908
Chiridota_g9909
Chiridota_g991PROTEIN NATD1
Chiridota_g9910
Chiridota_g9911
Chiridota_g9912CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG
Chiridota_g9913
Chiridota_g9914DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Chiridota_g9915
Chiridota_g9916DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Chiridota_g9917
Chiridota_g9918ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Chiridota_g9919
Chiridota_g992REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g9920
Chiridota_g9921
Chiridota_g9922
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