About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g9293
Chiridota_g9294
Chiridota_g9295
Chiridota_g9296
Chiridota_g9297
Chiridota_g9298TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED
Chiridota_g9299
Chiridota_g93RYBP AND YAF2-RELATED
Chiridota_g930
Chiridota_g9300O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN
Chiridota_g9301
Chiridota_g9302RAS-LIKE FAMILY MEMBER 11
Chiridota_g9303RAS-LIKE FAMILY MEMBER 11
Chiridota_g9304
Chiridota_g9305
Chiridota_g9306
Chiridota_g9307
Chiridota_g9308EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Chiridota_g9309SULFOTRANSFERASE SULT
Chiridota_g931
Chiridota_g9310
Chiridota_g9311
Chiridota_g9312METHYLTRANSFERASE TYPE 11
Chiridota_g9313GDP-L-FUCOSE SYNTHASE
Chiridota_g9314
Chiridota_g9315TUBBY-RELATED
Chiridota_g9316
Chiridota_g9317UNCHARACTERIZED
Chiridota_g9318HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Chiridota_g9319MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Chiridota_g932ALPHA-2,8-SIALYLTRANSFERASE
Chiridota_g9320
Chiridota_g9321CYTOKINE RECEPTOR
Chiridota_g9322CYTOKINE RECEPTOR
Chiridota_g9323GALACTOSE-3-O-SULFOTRANSFERASE
Chiridota_g9324GALACTOSE-3-O-SULFOTRANSFERASE
Chiridota_g9325
Chiridota_g9326
Chiridota_g9327TOL-PAL SYSTEM PROTEIN TOLA
Chiridota_g9328ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g9329
Chiridota_g933
Chiridota_g9330PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Chiridota_g9331
Chiridota_g9332
Chiridota_g9333
Chiridota_g9334DNA POLYMERASE
Chiridota_g9335
Chiridota_g9336
Chiridota_g9337INTEGRASE CORE DOMAIN CONTAINING PROTEIN
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