Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00315510 | TETRASPANIN |
| SKAU_T00315520 | |
| SKAU_T00315530 | |
| SKAU_T00315540 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| SKAU_T00315550 | PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED |
| SKAU_T00315560 | RAS-LIKE FAMILY MEMBER 11 |
| SKAU_T00315570 | 50S RIBOSOMAL PROTEIN L21 |
| SKAU_T00315580 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| SKAU_T00315590 | PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1 |
| SKAU_T00315600 | AMINO ACID TRANSPORTER |
| SKAU_T00315610 | TRANSMEMBRANE PROTEIN 208 |
| SKAU_T00315620 | ANOCTAMIN |
| SKAU_T00315630 | |
| SKAU_T00315640 | |
| SKAU_T00315650 | TETRASPANIN |
| SKAU_T00315660 | AROMATIC AMINO ACID HYDROXYLASE |
| SKAU_T00315670 | SERUM AMYLOID A |
| SKAU_T00315680 | |
| SKAU_T00315690 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315700 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315710 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315720 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315730 | YALI0A06105P |
| SKAU_T00315740 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315750 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315760 | |
| SKAU_T00315770 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315780 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315790 | |
| SKAU_T00315800 | |
| SKAU_T00315810 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315820 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315830 | |
| SKAU_T00315840 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315850 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315860 | |
| SKAU_T00315870 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315880 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| SKAU_T00315890 | |
| SKAU_T00315900 | TOLL-INTERACTING PROTEIN |
| SKAU_T00315910 | RUBY-EYE2-LIKE PROTEIN |
| SKAU_T00315920 | |
| SKAU_T00315930 | CADHERIN-23 |
| SKAU_T00315940 | |
| SKAU_T00315950 | NUCLEAR RECEPTOR COACTIVATOR 5-RELATED |
| SKAU_T00315960 | E3 UBIQUITIN-PROTEIN LIGASE SIAH2 |
| SKAU_T00315970 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00315980 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00315990 | |
| SKAU_T00316000 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
