The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032898521.1 | SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE |
| XP_032898522.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| XP_032898523.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032898524.1 | COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR-RELATED |
| XP_032898525.1 | |
| XP_032898526.1 | |
| XP_032898527.1 | NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1 |
| XP_032898528.1 | DED DOMAIN-CONTAINING PROTEIN |
| XP_032898529.1 | COATOMER |
| XP_032898530.1 | COATOMER |
| XP_032898531.1 | COATOMER |
| XP_032898532.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032898533.1 | COATOMER |
| XP_032898534.1 | COATOMER |
| XP_032898535.1 | NICASTRIN |
| XP_032898536.1 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| XP_032898537.1 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| XP_032898538.1 | PEROXISOMAL BIOGENESIS FACTOR 19 |
| XP_032898539.1 | PEROXISOMAL BIOGENESIS FACTOR 19 |
| XP_032898540.1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| XP_032898541.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032898542.1 | ETS |
| XP_032898543.1 | TRANSMEMBRANE GTPASE FZO1 |
| XP_032898544.1 | HOMEOBOX PROTEIN EMX-RELATED |
| XP_032898545.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032898546.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032898547.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032898548.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032898549.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032898550.1 | SHISA |
| XP_032898551.1 | SHISA |
| XP_032898552.1 | SHISA |
| XP_032898553.1 | SHISA |
| XP_032898554.1 | SHISA |
| XP_032898555.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032898556.1 | IMPORTIN-7, 8, 11 |
| XP_032898557.1 | LYSINE-SPECIFIC DEMETHYLASE |
| XP_032898558.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032898559.1 | LYSINE-SPECIFIC DEMETHYLASE |
| XP_032898560.1 | TUBULIN |
| XP_032898561.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR MSS4 |
| XP_032898562.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| XP_032898563.1 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| XP_032898564.1 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| XP_032898565.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032898566.1 | XLR/SCP3/FAM9 |
| XP_032898567.1 | XLR/SCP3/FAM9 |
| XP_032898568.1 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| XP_032898569.1 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| XP_032898570.1 | DENN DOMAIN-CONTAINING PROTEIN 2 |
