About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 603 604 605 606 607 608 609 610 611 612 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2182138.1SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED
KAK2182139.1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
KAK2182140.1-
KAK2182141.1-
KAK2182142.1ANKYRIN REPEAT AND SOCS BOX PROTEIN 17
KAK2182143.1ANAPHASE-PROMOTING COMPLEX 10
KAK2182144.1BETA-ALANINE-ACTIVATING ENZYME
KAK2182145.1BETA-ALANINE-ACTIVATING ENZYME
KAK2182146.1TRANSLATION FACTOR GUF1-RELATED
KAK2182147.1OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
KAK2182095.1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
KAK2182096.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
KAK2182097.1PROTON MYO-INOSITOL COTRANSPORTER
KAK2182098.1D-XYLOSE-PROTON SYMPORTER-LIKE 2
KAK2182099.1WASH COMPLEX SUBUNIT 4
KAK2182100.1KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
KAK2182101.1-
KAK2182102.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
KAK2182103.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
KAK2182104.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
TOP