The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032898121.1 | MITOCHONDRIAL ATP SYNTHASE B CHAIN |
| XP_032898122.1 | INTERLEUKIN-19-RELATED |
| XP_032898123.1 | INTERLEUKIN-19-RELATED |
| XP_032898124.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898125.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898126.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898127.1 | SI:DKEY-256H2.1 |
| XP_032898128.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898129.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898130.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032898131.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032898132.1 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| XP_032898133.1 | MHC CLASS I-RELATED |
| XP_032898134.1 | CALSEQUESTRIN |
| XP_032898135.1 | NEPHRIN |
| XP_032898136.1 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 |
| XP_032898137.1 | MYELIN P0 RELATED |
| XP_032898138.1 | SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT |
| XP_032898139.1 | SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT |
| XP_032898140.1 | PROTEIN FLATTOP |
| XP_032898141.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| XP_032898142.1 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| XP_032898143.1 | DC11 ACN9 HOMOLOG |
| XP_032898144.1 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| XP_032898145.1 | HOMEOBOX PROTEIN ARISTALESS |
| XP_032898146.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032898147.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032898148.1 | RNA RECOGNITION MOTIF-CONTAINING |
| XP_032898149.1 | DC11 ACN9 HOMOLOG |
| XP_032898150.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032898151.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032898152.1 | RAGULATOR COMPLEX PROTEIN LAMTOR5 |
| XP_032898153.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032898154.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032898155.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032898156.1 | MYOD FAMILY INHIBITOR |
| XP_032898157.1 | MIP04163P |
| XP_032898158.1 | MIP04163P |
| XP_032898159.1 | MIP04163P |
| XP_032898160.1 | MIP04163P |
| XP_032898161.1 | DYNEIN INTERMEDIATE CHAIN |
| XP_032898162.1 | MIP04163P |
| XP_032898163.1 | MIP04163P |
| XP_032898164.1 | MIP04163P |
| XP_032898165.1 | PROTEIN FAM72A-RELATED |
| XP_032898166.1 | SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN |
| XP_032898167.1 | MATRIX METALLOPROTEINASE |
| XP_032898168.1 | DYNEIN INTERMEDIATE CHAIN |
| XP_032898169.1 | IKB KINASE |
| XP_032898170.1 | SYNAPTOPHYSIN |
