Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000000252.1 | O-METHYLTRANSFERASE-RELATED |
| ENSZWYP00000000253.1 | SOLUTE CARRIER FAMILY 40 MEMBER |
| ENSZWYP00000000254.1 | |
| ENSZWYP00000000255.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 |
| ENSZWYP00000000256.1 | |
| ENSZWYP00000000257.1 | COLLAGEN ALPHA |
| ENSZWYP00000000258.1 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| ENSZWYP00000000259.1 | IRE1-RELATED |
| ENSZWYP00000000260.1 | ZINC FINGER MYM-TYPE PROTEIN |
| ENSZWYP00000000261.1 | COLLAGEN ALPHA |
| ENSZWYP00000000262.1 | |
| ENSZWYP00000000263.1 | SYNTAXIN |
| ENSZWYP00000000264.1 | PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL |
| ENSZWYP00000000265.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| ENSZWYP00000000266.1 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| ENSZWYP00000000267.1 | DYNEIN HEAVY CHAIN |
| ENSZWYP00000000268.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| ENSZWYP00000000269.1 | |
| ENSZWYP00000000270.1 | PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL |
| ENSZWYP00000000271.1 | DUMPY: SHORTER THAN WILD-TYPE |
| ENSZWYP00000000272.1 | ZINC FINGER MYM-TYPE PROTEIN |
| ENSZWYP00000000273.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| ENSZWYP00000000274.1 | |
| ENSZWYP00000000275.1 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
| ENSZWYP00000000276.1 | TECTONIC FAMILY MEMBER |
| ENSZWYP00000000277.1 | |
| ENSZWYP00000000278.1 | |
| ENSZWYP00000000279.1 | L-GULONOLACTONE OXIDASE |
| ENSZWYP00000000280.1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| ENSZWYP00000000281.1 | DUMPY: SHORTER THAN WILD-TYPE |
| ENSZWYP00000000282.1 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| ENSZWYP00000000283.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| ENSZWYP00000000284.1 | COMM DOMAIN-CONTAINING PROTEIN 9 |
| ENSZWYP00000000285.1 | PROMININ PROM PROTEIN |
| ENSZWYP00000000286.1 | TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT |
| ENSZWYP00000000287.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| ENSZWYP00000000288.1 | |
| ENSZWYP00000000289.1 | |
| ENSZWYP00000000290.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| ENSZWYP00000000291.1 | |
| ENSZWYP00000000292.1 | |
| ENSZWYP00000000293.1 | |
| ENSZWYP00000000294.1 | |
| ENSZWYP00000000295.1 | WD REPEAT-CONTAINING PROTEIN 75 |
| ENSZWYP00000000296.1 | UPF0041 BRAIN PROTEIN 44-RELATED |
| ENSZWYP00000000297.1 | CELL DIVISION PROTEIN KINASE |
| ENSZWYP00000000298.1 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| ENSZWYP00000000299.1 | COLLAGEN ALPHA |
| ENSZWYP00000000300.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| ENSZWYP00000000301.1 | POLYCYSTIN-1 |
