About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent~1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA591369-18,474

Gene Information

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Gene IDDescription
XP_032897521.1UNCHARACTERIZED
XP_032897522.1UNCHARACTERIZED
XP_032897523.1ZINC FINGER PROTEIN
XP_032897524.1ZINC FINGER PROTEIN
XP_032897525.1ZINC FINGER PROTEIN
XP_032897526.1MATRIX METALLOPROTEINASE
XP_032897527.1MATRIX METALLOPROTEINASE
XP_032897528.1SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
XP_032897529.1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
XP_032897530.1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
XP_032897531.1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
XP_032897532.1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
XP_032897533.1DNA REPAIR/RNA PROCESSING CPSF FAMILY
XP_032897534.1MYOSIN LIGHT CHAIN 1, 3
XP_032897535.1MYOSIN LIGHT CHAIN 1, 3
XP_032897536.1SORTING NEXIN 20, 21
XP_032897537.1SORTING NEXIN 20, 21
XP_032897538.1NEURALIZED
XP_032897539.1ENDOTHELIN
XP_032897540.1ANDROGEN-INDUCED PROTEIN 1-RELATED
XP_032897541.1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
XP_032897542.1TUBULIN POLYGLUTAMYLASE
XP_032897543.1TUBULIN POLYGLUTAMYLASE
XP_032897544.1CD83 ANTIGEN
XP_032897545.1ABC1 FAMILY PROTEIN
XP_032897546.1WHEY ACDIC PROTEIN WAP
XP_032897547.1UBIQUITIN-CONJUGATING ENZYME E2
XP_032897548.1DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1
XP_032897549.1BLADDER CANCER 10 KD PROTEIN HOMOLOG
XP_032897550.1TYROSINE-PROTEIN KINASE
XP_032897551.1TYROSINE-PROTEIN KINASE
XP_032897552.1TYROSINE-PROTEIN KINASE
XP_032897553.1TYROSINE-PROTEIN KINASE
XP_032897554.1MANNOSIDASE, BETA A, LYSOSOMAL-LIKE, MANBAL PROTEIN
XP_032897555.1MANNOSIDASE, BETA A, LYSOSOMAL-LIKE, MANBAL PROTEIN
XP_032897556.1GLUCAGON-FAMILY NEUROPEPTIDE
XP_032897557.1GLUCAGON-FAMILY NEUROPEPTIDE
XP_032897558.1GLUCAGON-FAMILY NEUROPEPTIDE
XP_032897559.1GLUCAGON-FAMILY NEUROPEPTIDE
XP_032897560.1RIBOPHORIN II
XP_032897561.1RIBOPHORIN II
XP_032897562.1RIBOPHORIN II
XP_032897563.1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
XP_032897564.1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
XP_032897565.1SOLUTE CARRIER FAMILY 39
XP_032897566.1LIPIN
XP_032897567.1LIPIN
XP_032897568.1CALCIUM BINDING PROTEINS
XP_032897569.1CALCIUM BINDING PROTEINS
XP_032897570.1CALCIUM BINDING PROTEINS
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