About Siphonodentalium dalli

Siphonodentalium dalli is a species of deep-sea scaphopod mollusk in the family Dentaliidae. It is commonly found in soft sediment habitats of the deep ocean, where it burrows into the substrate. This species is adapted to extreme environments, thriving in cold, dark, and high-pressure conditions. Siphonodentalium dalli plays a role in the benthic ecosystem by contributing to nutrient cycling and supporting microbial communities in its habitat.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Siphonodentalium dalliMollusca-Deep sea93-695Southern Ocean(63°56′06.7″S, 56°34′13.9″W)3019061

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3262209v12.3GbChromosome2023-The University of AlabamaPRJNA91695095.40%31,723

References
TitleJournalPubmed ID
Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sortingProceedings of the National Academy of Sciences37738291

Gene Information

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Gene IDDescription
Sda_chr09g01379.1ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR
Sda_chr09g01380.1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Sda_chr09g01381.1VHS DOMAIN CONTAINING PROTEIN FAMILY
Sda_chr09g01382.1AMSH-LIKE PROTEASE
Sda_chr09g01383.1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Sda_chr09g01384.1E3 UBIQUITIN-PROTEIN LIGASE ATL42
Sda_chr09g01385.1
Sda_chr09g01386.1TRANSMEMBRANE PROTEIN KIAA1109
Sda_chr09g01387.1DNA2/NAM7 HELICASE FAMILY
Sda_chr09g01388.1
Sda_chr09g01389.1GEO09659P1
Sda_chr09g01390.1TETRASPANIN
Sda_chr09g01391.1VILLIN
Sda_chr09g01392.1UNCHARACTERIZED
Sda_chr09g01393.1AP ENDONUCLEASE
Sda_chr09g01394.1
Sda_chr09g01395.1G-PROTEIN COUPLED RECEPTOR
Sda_chr09g01396.1G-PROTEIN COUPLED RECEPTOR
Sda_chr09g01397.1
Sda_chr09g01398.1MONOCARBOXYLATE TRANSPORTER
Sda_chr09g01399.1
Sda_chr09g01400.1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Sda_chr09g01401.1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Sda_chr09g01402.1
Sda_chr09g01403.1CRUMBS FAMILY MEMBER
Sda_chr09g01404.1
Sda_chr09g01405.1BETA TRANSDUCIN-RELATED PROTEIN
Sda_chr09g01406.1RAI16 PROTEIN-RELATED
Sda_chr09g01407.140S RIBOSOMAL PROTEIN S3A
Sda_chr09g01408.1LONG-CHAIN-FATTY-ACID--COA LIGASE
Sda_chr09g01409.1HEPARAN SULFATE SULFOTRANSFERASE
Sda_chr09g01410.1TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
Sda_chr09g01411.1
Sda_chr09g01412.1ET TRANSLATION PRODUCT-RELATED
Sda_chr09g01413.1UNCHARACTERIZED
Sda_chr09g01414.1ORGANIC SOLUTE TRANSPORTER-RELATED
Sda_chr09g01415.1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Sda_chr09g01416.1DNA LIGASE 1/3 FAMILY MEMBER
Sda_chr09g01417.1RHO FAMILY GTPASE
Sda_chr09g01418.1-
Sda_chr09g01419.1SOLUTE CARRIER FAMILY 35
Sda_chr09g01420.1
Sda_chr09g01421.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Sda_chr09g01422.1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Sda_chr09g01423.1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Sda_chr09g01424.1
Sda_chr09g01425.1PROTEIN DOK-7
Sda_chr09g01426.1INTEGRIN BETA SUBUNIT
Sda_chr09g01427.1
Sda_chr09g01428.1TRYPSIN-RELATED
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