About Siphonodentalium dalli

Siphonodentalium dalli is a species of deep-sea scaphopod mollusk in the family Dentaliidae. It is commonly found in soft sediment habitats of the deep ocean, where it burrows into the substrate. This species is adapted to extreme environments, thriving in cold, dark, and high-pressure conditions. Siphonodentalium dalli plays a role in the benthic ecosystem by contributing to nutrient cycling and supporting microbial communities in its habitat.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Siphonodentalium dalliMollusca-Deep sea93-695Southern Ocean(63°56′06.7″S, 56°34′13.9″W)3019061

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3262209v12.3GbChromosome2023-The University of AlabamaPRJNA91695095.40%31,723

References
TitleJournalPubmed ID
Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sortingProceedings of the National Academy of Sciences37738291

Gene Information

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Gene IDDescription
Sda_chr09g00829.1
Sda_chr09g00830.1
Sda_chr09g00831.1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Sda_chr09g00832.1CYTOCHROME P450 FAMILY 3
Sda_chr09g00833.1
Sda_chr09g00834.1N-LINKED OLIGOSACCHARIDE PROCESSING
Sda_chr09g00835.1RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG
Sda_chr09g00836.1CADHERIN-87A
Sda_chr09g00837.1ATP-DEPENDENT RNA HELICASE
Sda_chr09g00838.1ATP-DEPENDENT RNA HELICASE
Sda_chr09g00839.1CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Sda_chr09g00840.1
Sda_chr09g00841.1CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED
Sda_chr09g00842.1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Sda_chr09g00843.1MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Sda_chr09g00844.1TRANSMEMBRANE PROTEIN 33
Sda_chr09g00845.1SARCOGLYCANS
Sda_chr09g00846.1UNCHARACTERIZED
Sda_chr09g00847.1MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
Sda_chr09g00848.1TUBERIN
Sda_chr09g00849.1DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Sda_chr09g00850.1SIMILAR TO RIKEN CDNA E130308A19
Sda_chr09g00851.1
Sda_chr09g00852.1UNCHARACTERIZED
Sda_chr09g00853.1UNCHARACTERIZED
Sda_chr09g00854.1ACTIVATING TRANSCRIPTION FACTOR ATF 4/5
Sda_chr09g00855.1ALCOHOL DEHYDROGENASE
Sda_chr09g00856.1ALCOHOL DEHYDROGENASE
Sda_chr09g00857.1METHIONINE AMINOPEPTIDASE
Sda_chr09g00858.1TRANSMEMBRANE PROTEIN 192
Sda_chr09g00859.1STEROID RECEPTOR RNA ACTIVATOR 1
Sda_chr09g00860.1L-ASPARAGINASE
Sda_chr09g00861.1L-ASPARAGINASE
Sda_chr09g00862.1ZINC FINGER PROTEIN ZIC AND GLI
Sda_chr09g00863.1
Sda_chr09g00864.1NEUROTRANSMITTER GATED ION CHANNEL
Sda_chr09g00865.1
Sda_chr09g00866.1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Sda_chr09g00867.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00868.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00869.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00870.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00871.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00872.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00873.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00874.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Sda_chr09g00875.1
Sda_chr09g00876.1NEUROTRANSMITTER GATED ION CHANNEL
Sda_chr09g00877.1VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
Sda_chr09g00878.1SPHINGOMYELIN SYNTHETASE
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