Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00281010 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00281020 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00281030 | MYOSIN |
| SKAU_T00281040 | REVERSE TRANSCRIPTASES |
| SKAU_T00281050 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15 |
| SKAU_T00281060 | |
| SKAU_T00281070 | |
| SKAU_T00281080 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00281090 | |
| SKAU_T00281100 | |
| SKAU_T00281110 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00281120 | PROTEIN CBG26694 |
| SKAU_T00281130 | TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2 |
| SKAU_T00281140 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| SKAU_T00281150 | |
| SKAU_T00281160 | - |
| SKAU_T00281170 | I-KAPPA-B-LIKE PROTEIN IKBL |
| SKAU_T00281180 | SYNAPTOTAGMIN |
| SKAU_T00281190 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00281200 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00281210 | |
| SKAU_T00281220 | |
| SKAU_T00281230 | UNCHARACTERIZED |
| SKAU_T00281240 | PROTEIN CBG26694 |
| SKAU_T00281250 | GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 |
| SKAU_T00281260 | NEUROLIGIN |
| SKAU_T00281270 | NEUROLIGIN |
| SKAU_T00281280 | |
| SKAU_T00281290 | PROTEIN CBG26694 |
| SKAU_T00281300 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00281310 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00281320 | EPM2A-INTERACTING PROTEIN 1 |
| SKAU_T00281330 | |
| SKAU_T00281340 | ZINC FINGER PROTEIN |
| SKAU_T00281350 | TRANSPOSON |
| SKAU_T00281360 | GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 |
| SKAU_T00281370 | HAMARTIN |
| SKAU_T00281380 | PROTEIN CBG26694 |
| SKAU_T00281390 | |
| SKAU_T00281400 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00281410 | ENZYMATIC POLYPROTEIN-RELATED |
| SKAU_T00281420 | |
| SKAU_T00281430 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY |
| SKAU_T00281440 | |
| SKAU_T00281450 | |
| SKAU_T00281460 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| SKAU_T00281470 | |
| SKAU_T00281480 | |
| SKAU_T00281490 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00281500 | POL PROTEIN |
