Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00277510 | ACYL-COA DESATURASE |
| SKAU_T00277520 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| SKAU_T00277530 | ENOLASE-PHOSPHATASE E1 |
| SKAU_T00277540 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| SKAU_T00277550 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| SKAU_T00277560 | SYNAPTOBREVIN FAMILY MEMBER |
| SKAU_T00277570 | S-ADENOSYLMETHIONINE SYNTHETASE |
| SKAU_T00277580 | FAS-ASSOCIATED PROTEIN |
| SKAU_T00277590 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| SKAU_T00277600 | PUR-TRANSCRIPTIONAL ACTIVATOR |
| SKAU_T00277610 | DNA HELICASE RECQ FAMILY MEMBER |
| SKAU_T00277620 | |
| SKAU_T00277630 | HEREGULIN-NEUREGULIN FAMILY MEMBER |
| SKAU_T00277640 | |
| SKAU_T00277650 | |
| SKAU_T00277660 | |
| SKAU_T00277670 | |
| SKAU_T00277680 | CALCIUM BINDING PROTEINS |
| SKAU_T00277690 | UNCHARACTERIZED |
| SKAU_T00277700 | |
| SKAU_T00277710 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00277720 | |
| SKAU_T00277730 | AGAP004733-PA |
| SKAU_T00277740 | |
| SKAU_T00277750 | AGAP004733-PA |
| SKAU_T00277760 | |
| SKAU_T00277770 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00277780 | |
| SKAU_T00277790 | |
| SKAU_T00277800 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00277810 | |
| SKAU_T00277820 | MULTIVESICULAR BODY SUBUNIT 12B |
| SKAU_T00277830 | MULTIVESICULAR BODY SUBUNIT 12B |
| SKAU_T00277840 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00277850 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| SKAU_T00277860 | |
| SKAU_T00277870 | |
| SKAU_T00277880 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| SKAU_T00277890 | |
| SKAU_T00277900 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| SKAU_T00277910 | |
| SKAU_T00277920 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1 |
| SKAU_T00277930 | RAB GDP/GTP EXCHANGE FACTOR |
| SKAU_T00277940 | |
| SKAU_T00277950 | |
| SKAU_T00277960 | SI:CH211-243P7.3-RELATED |
| SKAU_T00277970 | |
| SKAU_T00277980 | |
| SKAU_T00277990 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00278000 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
