The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032895571.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032895572.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 87 |
| XP_032895573.1 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 |
| XP_032895574.1 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 |
| XP_032895575.1 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 |
| XP_032895576.1 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 |
| XP_032895577.1 | UNCHARACTERIZED |
| XP_032895578.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895579.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895580.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895581.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895582.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895583.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895584.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895585.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895586.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895587.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895588.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895589.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895590.1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| XP_032895591.1 | UNCHARACTERIZED |
| XP_032895592.1 | UNCHARACTERIZED |
| XP_032895593.1 | CYTOSKELETON-ASSOCIATED PROTEIN 4 |
| XP_032895594.1 | INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE-INTERACTING PROTEIN |
| XP_032895595.1 | INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE-INTERACTING PROTEIN |
| XP_032895596.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 71 |
| XP_032895597.1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| XP_032895598.1 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 |
| XP_032895599.1 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 |
| XP_032895600.1 | HMG BOX-CONTAINING PROTEIN 1 |
| XP_032895601.1 | HMG BOX-CONTAINING PROTEIN 1 |
| XP_032895602.1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032895603.1 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| XP_032895604.1 | TRNA-DIHYDROURIDINE SYNTHASE |
| XP_032895605.1 | TRNA-DIHYDROURIDINE SYNTHASE |
| XP_032895606.1 | TRNA-DIHYDROURIDINE SYNTHASE |
| XP_032895607.1 | TRNA-DIHYDROURIDINE SYNTHASE |
| XP_032895608.1 | BCR-ASSOCIATED PROTEIN, BAP |
| XP_032895609.1 | BCR-ASSOCIATED PROTEIN, BAP |
| XP_032895610.1 | SULFATE TRANSPORTER |
| XP_032895611.1 | SULFATE TRANSPORTER |
| XP_032895612.1 | SULFATE TRANSPORTER |
| XP_032895613.1 | SULFATE TRANSPORTER |
| XP_032895614.1 | CYCLINS |
| XP_032895615.1 | CYCLINS |
| XP_032895616.1 | POLYCYSTIN-1 |
| XP_032895617.1 | FRUCTOSE-2,6-BISPHOSPHATASE TIGAR |
| XP_032895618.1 | FRUCTOSE-2,6-BISPHOSPHATASE TIGAR |
| XP_032895619.1 | FIBROBLAST GROWTH FACTOR |
| XP_032895620.1 | UNCHARACTERIZED |
