Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00273510 | LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN |
| SKAU_T00273520 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
| SKAU_T00273530 | - |
| SKAU_T00273540 | AGAP004733-PA |
| SKAU_T00273550 | NF-KAPPA B ACTIVATING PROTEIN |
| SKAU_T00273560 | A-KINASE ANCHOR PROTEIN 14 |
| SKAU_T00273570 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| SKAU_T00273580 | CYCLINS |
| SKAU_T00273590 | |
| SKAU_T00273600 | ENDONUCLEASE-RELATED |
| SKAU_T00273610 | |
| SKAU_T00273620 | |
| SKAU_T00273630 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00273640 | |
| SKAU_T00273650 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00273660 | WASP-1 |
| SKAU_T00273670 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00273680 | VIRAL ENVELOPE PROTEIN |
| SKAU_T00273690 | DIACYLGLYCEROL KINASE |
| SKAU_T00273700 | |
| SKAU_T00273710 | CLATHRIN ASSEMBLY PROTEIN |
| SKAU_T00273720 | RAB FAMILY |
| SKAU_T00273730 | DRAB11-RELATED |
| SKAU_T00273740 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| SKAU_T00273750 | KNIRPS-RELATED PROTEIN-RELATED |
| SKAU_T00273760 | UNCHARACTERIZED |
| SKAU_T00273770 | OLIGOPHRENIN 1 |
| SKAU_T00273780 | RHO-TYPE GTPASE ACTIVATING PROTEIN |
| SKAU_T00273790 | GLYCOPROTEIN HORMONE RECEPTOR |
| SKAU_T00273800 | TRANSPOSON |
| SKAU_T00273810 | |
| SKAU_T00273820 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| SKAU_T00273830 | |
| SKAU_T00273840 | UPF0428 PROTEIN CXORF56 |
| SKAU_T00273850 | BRYOPORIN |
| SKAU_T00273860 | |
| SKAU_T00273870 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| SKAU_T00273880 | |
| SKAU_T00273890 | |
| SKAU_T00273900 | |
| SKAU_T00273910 | |
| SKAU_T00273920 | |
| SKAU_T00273930 | SI:CH211-108C17.2-RELATED-RELATED |
| SKAU_T00273940 | RETROTRANSPOSON |
| SKAU_T00273950 | ZGC:195170 |
| SKAU_T00273960 | |
| SKAU_T00273970 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
| SKAU_T00273980 | 5-OXOPROLINASE RELATED |
| SKAU_T00273990 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| SKAU_T00274000 | GRB10 INTERACTING GYF PROTEIN |
