Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00251510 | UPF0524 PROTEIN C3ORF70 |
| SKAU_T00251520 | |
| SKAU_T00251530 | |
| SKAU_T00251540 | |
| SKAU_T00251550 | KELCH PROTEIN |
| SKAU_T00251560 | |
| SKAU_T00251570 | NME/NM23 FAMILY MEMBER 8 |
| SKAU_T00251580 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| SKAU_T00251590 | |
| SKAU_T00251600 | COLLAGEN ALPHA |
| SKAU_T00251610 | |
| SKAU_T00251620 | |
| SKAU_T00251630 | COLLAGEN ALPHA |
| SKAU_T00251640 | KU AUTOANTIGEN DNA HELICASE |
| SKAU_T00251650 | TRANSMEMBRANE PROTEIN 169 |
| SKAU_T00251660 | 60S RIBOSOMAL PROTEIN L43 |
| SKAU_T00251670 | PROTEIN SIX6OS1 |
| SKAU_T00251680 | PHOSPHOFRUCTOKINASE |
| SKAU_T00251690 | SERINE-THREONINE PROTEIN KINASE |
| SKAU_T00251700 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| SKAU_T00251710 | HYCCIN RELATED |
| SKAU_T00251720 | |
| SKAU_T00251730 | DED DOMAIN-CONTAINING PROTEIN |
| SKAU_T00251740 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| SKAU_T00251750 | |
| SKAU_T00251760 | |
| SKAU_T00251770 | |
| SKAU_T00251780 | |
| SKAU_T00251790 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
| SKAU_T00251800 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
| SKAU_T00251810 | |
| SKAU_T00251820 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
| SKAU_T00251830 | |
| SKAU_T00251840 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| SKAU_T00251850 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
| SKAU_T00251860 | MUSCLEBLIND-LIKE PROTEIN |
| SKAU_T00251870 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00251880 | ZINC FINGER PROTEIN DZIP1 |
| SKAU_T00251890 | CLAUDIN |
| SKAU_T00251900 | CLAUDIN |
| SKAU_T00251910 | CLAUDIN |
| SKAU_T00251920 | CLAUDIN |
| SKAU_T00251930 | ATP-BINDING CASSETTE SUB-FAMILY C |
| SKAU_T00251940 | DAPPER-RELATED |
| SKAU_T00251950 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00251960 | |
| SKAU_T00251970 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED |
| SKAU_T00251980 | TYROSINASE FAMILY MEMBER |
| SKAU_T00251990 | GLYPICAN |
| SKAU_T00252000 | GLYPICAN |
