Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000023302.1 | 50S RIBOSOMAL PROTEIN L3 |
| ENSQHTP00000023303.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| ENSQHTP00000023304.1 | UNCHARACTERIZED |
| ENSQHTP00000023305.1 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| ENSQHTP00000023306.1 | SAPOSIN-RELATED |
| ENSQHTP00000023307.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| ENSQHTP00000023308.1 | RIBONUCLEASE P PROTEIN SUBUNIT P40 |
| ENSQHTP00000023309.1 | |
| ENSQHTP00000023310.1 | |
| ENSQHTP00000023311.1 | FASCIN |
| ENSQHTP00000023312.1 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| ENSQHTP00000023313.1 | RIBONUCLEASE P PROTEIN SUBUNIT P40 |
| ENSQHTP00000023314.1 | |
| ENSQHTP00000023315.1 | SAPOSIN-RELATED |
| ENSQHTP00000023316.1 | METALLOPROTEASE TLDD |
| ENSQHTP00000023317.1 | CEREBELLIN-RELATED |
| ENSQHTP00000023318.1 | RHO FAMILY GTPASE |
| ENSQHTP00000023319.1 | CENTROSOMAL PROTEIN OF 76 KDA |
| ENSQHTP00000023320.1 | - |
| ENSQHTP00000023321.1 | ALR/ERV |
| ENSQHTP00000023322.1 | RHO FAMILY GTPASE |
| ENSQHTP00000023323.1 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| ENSQHTP00000023324.1 | VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 |
| ENSQHTP00000023325.1 | NF-KAPPA-B INHIBITOR ALPHA |
| ENSQHTP00000023326.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| ENSQHTP00000023327.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| ENSQHTP00000023328.1 | RIKEN CDNA 6820408C15 |
| ENSQHTP00000023329.1 | EPSIN/ENT-RELATED |
| ENSQHTP00000023330.1 | UNCHARACTERIZED |
| ENSQHTP00000023331.1 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| ENSQHTP00000023332.1 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
| ENSQHTP00000023333.1 | PIKACHURIN-LIKE PROTEIN |
| ENSQHTP00000023334.1 | UNCHARACTERIZED |
| ENSQHTP00000023335.1 | RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN |
| ENSQHTP00000023336.1 | |
| ENSQHTP00000023337.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| ENSQHTP00000023338.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| ENSQHTP00000023339.1 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
| ENSQHTP00000023340.1 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
| ENSQHTP00000023341.1 | UNCHARACTERIZED |
| ENSQHTP00000023342.1 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| ENSQHTP00000023343.1 | CADHERIN-23 |
| ENSQHTP00000023344.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| ENSQHTP00000023345.1 | GLUTATHIONE PEROXIDASE |
| ENSQHTP00000023346.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| ENSQHTP00000023347.1 | GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBER |
| ENSQHTP00000023348.1 | CARBONIC ANHYDRASE |
| ENSQHTP00000023349.1 | |
| ENSQHTP00000023350.1 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| ENSQHTP00000023351.1 | POLYCYSTIN FAMILY MEMBER |
