The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032890071.1 | ATP SYNTHASE MEMBRANE SUBUNIT DAPIT, MITOCHONDRIAL |
| XP_032890072.1 | CALCIUM HOMEOSTASIS MODULATOR PROTEIN |
| XP_032890073.1 | CALCIUM HOMEOSTASIS MODULATOR PROTEIN |
| XP_032890074.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890075.1 | ALPHA-2,8-SIALYLTRANSFERASE |
| XP_032890076.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890077.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890078.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890079.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890080.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032890081.1 | UNCHARACTERIZED |
| XP_032890082.1 | UNCHARACTERIZED |
| XP_032890083.1 | UNCHARACTERIZED |
| XP_032890084.1 | UNCHARACTERIZED |
| XP_032890085.1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| XP_032890086.1 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
| XP_032890087.1 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
| XP_032890088.1 | PROTEIN CBG12474 |
| XP_032890089.1 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
| XP_032890090.1 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
| XP_032890091.1 | COLLAGEN ALPHA |
| XP_032890092.1 | |
| XP_032890093.1 | REPLICATION PROTEIN A-RELATED |
| XP_032890094.1 | REPLICATION PROTEIN A-RELATED |
| XP_032890095.1 | REPLICATION PROTEIN A-RELATED |
| XP_032890096.1 | REPLICATION PROTEIN A-RELATED |
| XP_032890097.1 | REPLICATION PROTEIN A-RELATED |
| XP_032890098.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| XP_032890099.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| XP_032890100.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| XP_032890101.1 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
| XP_032890102.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890103.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890104.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890105.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890106.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890107.1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| XP_032890108.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| XP_032890109.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| XP_032890110.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| XP_032890111.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| XP_032890112.1 | GLIAL FIBRILLARY ACIDIC PROTEIN |
| XP_032890113.1 | POLYCOMB GROUP RING FINGER PROTEIN |
| XP_032890114.1 | POLYCOMB GROUP RING FINGER PROTEIN |
| XP_032890115.1 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
| XP_032890116.1 | POLYCOMB GROUP RING FINGER PROTEIN |
| XP_032890117.1 | POLYCOMB GROUP RING FINGER PROTEIN |
| XP_032890118.1 | POLYCOMB GROUP RING FINGER PROTEIN |
| XP_032890119.1 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
| XP_032890120.1 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
