About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-684Mbscaffold2019--PRJNA47284691.70%25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka21101HOMEOBOX PROTEIN ENGRAILED
Tanaka21102RNA-BINDING PROTEIN 33
Tanaka21103HEDGEHOG
Tanaka21104RING FINGER PROTEIN 32
Tanaka21105LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR
Tanaka21106CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Tanaka21107MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN
Tanaka21108UBIQUITIN-PROTEIN LIGASE E3C
Tanaka21109DNAJ HOMOLOG SUBFAMILY B MEMBER 2
Tanaka21110IA-2 PROTEIN TYROSINE PHOSPHATASE, ISOFORM C
Tanaka21111CONDENSIN-2 COMPLEX SUBUNIT G2
Tanaka21112EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C
Tanaka21113WD REPEAT DOMAIN 60
Tanaka21114SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
Tanaka21115APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Tanaka21116TUMOR ENDOTHELIAL MARKER 7 RELATED
Tanaka21117GTPASE, IMAP FAMILY MEMBER-RELATED
Tanaka21118CHARGED MULTIVESICULAR BODY PROTEIN
Tanaka21119ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
Tanaka21120REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1
Tanaka21121
Tanaka21122ADP RIBOSYLATION FACTOR-RELATED
Tanaka21123NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Tanaka21124VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT
Tanaka21125SOLUTE CARRIER FAMILY 39
Tanaka21126MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Tanaka21127MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Tanaka21128MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Tanaka21129MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Tanaka21130TRANSMEMBRANE PROTEIN 236
Tanaka21131VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
Tanaka21132MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Tanaka21133THYMIDYLATE SYNTHASE 1
Tanaka21134ENOLASE SUPERFAMILY, MANDELATE RACEMASE
Tanaka21135TYROSINE-PROTEIN KINASE
Tanaka21136GLUCAGON-FAMILY NEUROPEPTIDE
Tanaka21137N6-ADENOSINE-METHYLTRANSFERASE
Tanaka21138UNCHARACTERIZED
Tanaka21139EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Tanaka21140TITIN
Tanaka21141MYOSIN REGULATORY LIGHT CHAIN 2
Tanaka21142FAST LEU-RICH DOMAIN-CONTAINING
Tanaka21143CHARGED MULTIVESICULAR BODY PROTEIN
Tanaka21144NEUROPEPTIDES RECEPTOR
Tanaka21145REGULATOR OF G PROTEIN SIGNALING
Tanaka21146LYSOPHOSPHOLIPASE-RELATED
Tanaka2114750S RIBOSOMAL PROTEIN L15
Tanaka21148SOX TRANSCRIPTION FACTOR
Tanaka21149SOX TRANSCRIPTION FACTOR
Tanaka21150RETINITIS PIGMENTOSA 1 PROTEIN
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