About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent~1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA591369-18,474

Gene Information

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Gene IDDescription
XP_032888821.1PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
XP_032888822.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
XP_032888823.1SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED
XP_032888824.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888825.1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
XP_032888826.1THRAP3/BCLAF1
XP_032888827.1THRAP3/BCLAF1
XP_032888828.1THRAP3/BCLAF1
XP_032888829.1THRAP3/BCLAF1
XP_032888830.1THRAP3/BCLAF1
XP_032888831.1THRAP3/BCLAF1
XP_032888832.1ADP-RIBOSYLGLYCOHYDROLASE
XP_032888833.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888834.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888835.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888836.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888837.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888838.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888839.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888840.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888841.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888842.1PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
XP_032888843.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888844.1UNCHARACTERIZED
XP_032888845.1MICOS COMPLEX SUBUNIT MIC26 / MIC27 FAMILY MEMBER
XP_032888846.1PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
XP_032888847.1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
XP_032888848.1SPERMINE SYNTHASE
XP_032888849.1CULLIN
XP_032888850.1CULLIN
XP_032888851.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888852.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
XP_032888853.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
XP_032888854.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
XP_032888855.1COAGULATION FACTOR
XP_032888856.1RHO GUANINE EXCHANGE FACTOR-RELATED
XP_032888857.1RHO GUANINE EXCHANGE FACTOR-RELATED
XP_032888858.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032888859.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032888860.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888861.1UNCHARACTERIZED
XP_032888862.1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
XP_032888863.1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
XP_032888864.1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
XP_032888865.1TGF-BETA FAMILY
XP_032888866.1TGF-BETA FAMILY
XP_032888867.1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
XP_032888868.1TGF-BETA FAMILY
XP_032888869.1LD18447P
XP_032888870.1LD18447P
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