Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000008242.1 | PYRUVATE KINASE |
| ENSQHTP00000008243.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| ENSQHTP00000008244.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| ENSQHTP00000008245.1 | - |
| ENSQHTP00000008246.1 | SYNAPTOBREVIN FAMILY MEMBER |
| ENSQHTP00000008247.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| ENSQHTP00000008248.1 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| ENSQHTP00000008249.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| ENSQHTP00000008250.1 | PYRUVATE KINASE |
| ENSQHTP00000008251.1 | ZINC FINGER PROTEIN 200 |
| ENSQHTP00000008252.1 | NAD(P)H-HYDRATE EPIMERASE |
| ENSQHTP00000008253.1 | SULFOTRANSFERASE SULT |
| ENSQHTP00000008254.1 | NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED |
| ENSQHTP00000008255.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| ENSQHTP00000008256.1 | UPF0315 PROTEIN-RELATED |
| ENSQHTP00000008257.1 | - |
| ENSQHTP00000008258.1 | UPF0565 PROTEIN C2ORF69 |
| ENSQHTP00000008259.1 | O-ACYLTRANSFERASE |
| ENSQHTP00000008260.1 | PYRUVATE KINASE |
| ENSQHTP00000008261.1 | NAD(P)H-HYDRATE EPIMERASE |
