The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032888121.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032888122.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032888123.1 | ZINC FINGER B-BOX DOMAIN-CONTAINING PROTEIN 1 |
| XP_032888124.1 | WD40 REPEAT DOMAIN 95 |
| XP_032888125.1 | TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2 |
| XP_032888126.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032888127.1 | MYOTROPHIN |
| XP_032888128.1 | CALCIUM-SENSING RECEPTOR-RELATED |
| XP_032888129.1 | CALCIUM-SENSING RECEPTOR-RELATED |
| XP_032888130.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 16 |
| XP_032888131.1 | ZINC FINGER MATRIN-TYPE PROTEIN 3 |
| XP_032888132.1 | PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 |
| XP_032888133.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032888134.1 | CATION-TRANSPORTING ATPASE-RELATED |
| XP_032888135.1 | RNA BINDING PROTEIN |
| XP_032888136.1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| XP_032888137.1 | ALKALINE PHOSPHATASE |
| XP_032888138.1 | PARANEOPLASTIC ANTIGEN |
| XP_032888139.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4 |
| XP_032888140.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4 |
| XP_032888141.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032888142.1 | RNA BINDING PROTEIN |
| XP_032888143.1 | COAGULATION FACTOR |
| XP_032888144.1 | ESPIN |
| XP_032888145.1 | ARRESTIN |
| XP_032888146.1 | ARRESTIN |
| XP_032888147.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032888148.1 | TRANSFERRIN |
| XP_032888149.1 | LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE |
| XP_032888150.1 | RNA BINDING PROTEIN |
| XP_032888151.1 | LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE |
| XP_032888152.1 | LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE |
| XP_032888153.1 | MAESTRO-RELATED HEAT DOMAIN-CONTAINING |
| XP_032888154.1 | SIALIDASE |
| XP_032888155.1 | MYOSIN VII, XV |
| XP_032888156.1 | RNA BINDING PROTEIN |
| XP_032888157.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032888158.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032888159.1 | |
| XP_032888160.1 | RNA BINDING PROTEIN |
| XP_032888161.1 | LEUCINE RICH REPEAT PROTEIN |
| XP_032888162.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032888163.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032888164.1 | RNA BINDING PROTEIN |
| XP_032888165.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032888166.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032888167.1 | |
| XP_032888168.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032888169.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032888170.1 | RNA BINDING PROTEIN |
