About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g10132
Chiridota_g10133PR DOMAIN ZINC FINGER PROTEIN
Chiridota_g10134
Chiridota_g10135TGF-BETA INDUCED APOPTOSIS PROTEIN
Chiridota_g10136
Chiridota_g10137N-ACETYLGLUTAMATE SYNTHASE
Chiridota_g10138
Chiridota_g10139
Chiridota_g1014TYROSINE-PROTEIN KINASE RECEPTOR
Chiridota_g10140DYNACTIN 1-RELATED MICROTUBULE-BINDING
Chiridota_g10141
Chiridota_g10142
Chiridota_g10143ZINC FINGER PROTEIN
Chiridota_g10144
Chiridota_g10145CYCLIN Y, ISOFORM A
Chiridota_g10146FATTY ACID DESATURASE 2
Chiridota_g10147COILED-COIL DOMAIN-CONTAINING PROTEIN 14
Chiridota_g10148
Chiridota_g10149
Chiridota_g1015
Chiridota_g10150
Chiridota_g10151KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Chiridota_g10152
Chiridota_g10153
Chiridota_g10154
Chiridota_g10155
Chiridota_g10156
Chiridota_g10157SET DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g10158ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043
Chiridota_g10159
Chiridota_g1016PLEXIN
Chiridota_g10160TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
Chiridota_g10161-
Chiridota_g10162ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Chiridota_g10163NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
Chiridota_g10164HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
Chiridota_g10165UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Chiridota_g10166GEMININ
Chiridota_g10167-
Chiridota_g10168
Chiridota_g10169TATA-BOX BINDING PROTEIN
Chiridota_g1017
Chiridota_g10170CYTOSOLIC CARBOXYPEPTIDASE
Chiridota_g10171SISTER CHROMATID COHESION PROTEIN DCC1-RELATED
Chiridota_g10172
Chiridota_g10173PLACENTAL PROTEIN 11-RELATED
Chiridota_g10174HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Chiridota_g10175
Chiridota_g10176
Chiridota_g10177
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