Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00197010 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |
| SKAU_T00197020 | TGF-BETA FAMILY |
| SKAU_T00197030 | |
| SKAU_T00197040 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00197050 | ADENYLATE CYCLASE TYPE 1 |
| SKAU_T00197060 | WD REPEAT PROTEIN 26-RELATED |
| SKAU_T00197070 | ZYGIN |
| SKAU_T00197080 | |
| SKAU_T00197090 | SI:CH211-196P9.1-RELATED |
| SKAU_T00197100 | |
| SKAU_T00197110 | |
| SKAU_T00197120 | ENDONUCLEASE-RELATED |
| SKAU_T00197130 | |
| SKAU_T00197140 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00197150 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00197160 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10 |
| SKAU_T00197170 | FLAP ENDONUCLEASE FAMILY MEMBER |
| SKAU_T00197180 | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 |
| SKAU_T00197190 | UNCHARACTERIZED |
| SKAU_T00197200 | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 |
| SKAU_T00197210 | CYTOCHROME P450 508A4-RELATED |
| SKAU_T00197220 | SI:DKEY-126G1.9-RELATED |
| SKAU_T00197230 | PRENYLTRANSFERASES |
| SKAU_T00197240 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00197250 | |
| SKAU_T00197260 | EPH RECEPTOR A5 |
| SKAU_T00197270 | REVERSE TRANSCRIPTASES |
| SKAU_T00197280 | PROTEIN CBG26694 |
| SKAU_T00197290 | |
| SKAU_T00197300 | |
| SKAU_T00197310 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00197320 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| SKAU_T00197330 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 |
| SKAU_T00197340 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00197350 | CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA |
| SKAU_T00197360 | PHOSPHATIDYLINOSITOL KINASE |
| SKAU_T00197370 | |
| SKAU_T00197380 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00197390 | |
| SKAU_T00197400 | NEUROLIGIN |
| SKAU_T00197410 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00197420 | NEUROLIGIN |
| SKAU_T00197430 | SI:CH211-196P9.1-RELATED |
| SKAU_T00197440 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00197450 | PROTEIN ECT2 |
| SKAU_T00197460 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| SKAU_T00197470 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00197480 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| SKAU_T00197490 | |
| SKAU_T00197500 |
