About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold6874.18714STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold6874.18715STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold6874.18716STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold6874.18717HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
mRNA.BJAM.scaffold6878.18719TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
mRNA.BJAM.scaffold688.4666CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold6884.18720PROTEIN HID1
mRNA.BJAM.scaffold6886.18721
mRNA.BJAM.scaffold6886.18722
mRNA.BJAM.scaffold6886.18723
mRNA.BJAM.scaffold6886.18724EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
mRNA.BJAM.scaffold6886.18725EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
mRNA.BJAM.scaffold6887.18727DNAJ HOMOLOG SUBFAMILY C MEMBER 21
mRNA.BJAM.scaffold689.4667LIPASE
mRNA.BJAM.scaffold6890.18728SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold6893.18729
mRNA.BJAM.scaffold6895.18730NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold69.501OSTEOCLAST-STIMULATING FACTOR 1
mRNA.BJAM.scaffold69.502TGF-BETA FAMILY
mRNA.BJAM.scaffold69.503
mRNA.BJAM.scaffold69.504
mRNA.BJAM.scaffold69.505BIOTIN PROTEIN LIGASE
mRNA.BJAM.scaffold69.506ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2
mRNA.BJAM.scaffold69.507
mRNA.BJAM.scaffold69.508GLUTAMINE-TRNA LIGASE
mRNA.BJAM.scaffold69.509PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
mRNA.BJAM.scaffold69.510STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
mRNA.BJAM.scaffold69.511
mRNA.BJAM.scaffold69.512QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE
mRNA.BJAM.scaffold69.513MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL
mRNA.BJAM.scaffold6901.18731NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
mRNA.BJAM.scaffold6903.18732ALANINE AMINOTRANSFERASE
mRNA.BJAM.scaffold6903.18733ALANINE AMINOTRANSFERASE
mRNA.BJAM.scaffold6906.18734
mRNA.BJAM.scaffold6906.18735ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B
mRNA.BJAM.scaffold6906.18736
mRNA.BJAM.scaffold6906.18737
mRNA.BJAM.scaffold691.4668ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1
mRNA.BJAM.scaffold691.4669ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1
mRNA.BJAM.scaffold691.4670PREFOLDIN SUBUNIT 5
mRNA.BJAM.scaffold691.4671CULLIN
mRNA.BJAM.scaffold691.4672
mRNA.BJAM.scaffold691.4673PUTATIVE-RELATED
mRNA.BJAM.scaffold691.4674G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold691.4675
mRNA.BJAM.scaffold691.4676EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED
mRNA.BJAM.scaffold6910.18738PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
mRNA.BJAM.scaffold6910.18739THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold6910.18740THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold6911.18741UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
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