Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathynomus jamesi | Arthropoda | - | Hydrothermal vent | 898 | near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E) | 1955234 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM2301448v1 | 5.89Gb | Contig | 2022 | JAJOZX01 | Institute of Oceanology, Chinese Academy of Sciences | PRJNA776076 | 94.80% | 23,221 |
Title | Journal | Pubmed ID |
---|---|---|
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment | BMC Biology | 35562825 |
Gene ID | Description |
---|---|
mRNA.BJAM.scaffold6874.18714 | STRUCTURAL CONTITUENT OF CUTICLE |
mRNA.BJAM.scaffold6874.18715 | STRUCTURAL CONTITUENT OF CUTICLE |
mRNA.BJAM.scaffold6874.18716 | STRUCTURAL CONTITUENT OF CUTICLE |
mRNA.BJAM.scaffold6874.18717 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
mRNA.BJAM.scaffold6878.18719 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
mRNA.BJAM.scaffold688.4666 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
mRNA.BJAM.scaffold6884.18720 | PROTEIN HID1 |
mRNA.BJAM.scaffold6886.18721 | |
mRNA.BJAM.scaffold6886.18722 | |
mRNA.BJAM.scaffold6886.18723 | |
mRNA.BJAM.scaffold6886.18724 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
mRNA.BJAM.scaffold6886.18725 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
mRNA.BJAM.scaffold6887.18727 | DNAJ HOMOLOG SUBFAMILY C MEMBER 21 |
mRNA.BJAM.scaffold689.4667 | LIPASE |
mRNA.BJAM.scaffold6890.18728 | SERINE PROTEASE INHIBITOR, SERPIN |
mRNA.BJAM.scaffold6893.18729 | |
mRNA.BJAM.scaffold6895.18730 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
mRNA.BJAM.scaffold69.501 | OSTEOCLAST-STIMULATING FACTOR 1 |
mRNA.BJAM.scaffold69.502 | TGF-BETA FAMILY |
mRNA.BJAM.scaffold69.503 | |
mRNA.BJAM.scaffold69.504 | |
mRNA.BJAM.scaffold69.505 | BIOTIN PROTEIN LIGASE |
mRNA.BJAM.scaffold69.506 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 |
mRNA.BJAM.scaffold69.507 | |
mRNA.BJAM.scaffold69.508 | GLUTAMINE-TRNA LIGASE |
mRNA.BJAM.scaffold69.509 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
mRNA.BJAM.scaffold69.510 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
mRNA.BJAM.scaffold69.511 | |
mRNA.BJAM.scaffold69.512 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
mRNA.BJAM.scaffold69.513 | MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL |
mRNA.BJAM.scaffold6901.18731 | NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE |
mRNA.BJAM.scaffold6903.18732 | ALANINE AMINOTRANSFERASE |
mRNA.BJAM.scaffold6903.18733 | ALANINE AMINOTRANSFERASE |
mRNA.BJAM.scaffold6906.18734 | |
mRNA.BJAM.scaffold6906.18735 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B |
mRNA.BJAM.scaffold6906.18736 | |
mRNA.BJAM.scaffold6906.18737 | |
mRNA.BJAM.scaffold691.4668 | ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 |
mRNA.BJAM.scaffold691.4669 | ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 |
mRNA.BJAM.scaffold691.4670 | PREFOLDIN SUBUNIT 5 |
mRNA.BJAM.scaffold691.4671 | CULLIN |
mRNA.BJAM.scaffold691.4672 | |
mRNA.BJAM.scaffold691.4673 | PUTATIVE-RELATED |
mRNA.BJAM.scaffold691.4674 | G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED |
mRNA.BJAM.scaffold691.4675 | |
mRNA.BJAM.scaffold691.4676 | EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED |
mRNA.BJAM.scaffold6910.18738 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
mRNA.BJAM.scaffold6910.18739 | THIOREDOXIN PEROXIDASE |
mRNA.BJAM.scaffold6910.18740 | THIOREDOXIN PEROXIDASE |
mRNA.BJAM.scaffold6911.18741 | UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING |