About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold665.4565
mRNA.BJAM.scaffold665.4566
mRNA.BJAM.scaffold6655.18470GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
mRNA.BJAM.scaffold6655.18471GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
mRNA.BJAM.scaffold6655.18472
mRNA.BJAM.scaffold6657.18475SERUM RESPONSE FACTOR HOMOLOG
mRNA.BJAM.scaffold6657.18476
mRNA.BJAM.scaffold6658.18477
mRNA.BJAM.scaffold6658.18478
mRNA.BJAM.scaffold666.4567
mRNA.BJAM.scaffold666.4568RING FINGER PROTEIN 17
mRNA.BJAM.scaffold666.4569
mRNA.BJAM.scaffold666.4570
mRNA.BJAM.scaffold666.4571METHIONINE--TRNA LIGASE
mRNA.BJAM.scaffold6660.18479CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold6663.18480
mRNA.BJAM.scaffold6664.18481
mRNA.BJAM.scaffold6664.18482
mRNA.BJAM.scaffold6664.18483UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1
mRNA.BJAM.scaffold6664.18484UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1
mRNA.BJAM.scaffold6664.18485
mRNA.BJAM.scaffold6665.18486
mRNA.BJAM.scaffold6665.18487SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
mRNA.BJAM.scaffold6665.18488
mRNA.BJAM.scaffold6665.18489
mRNA.BJAM.scaffold6665.18490IONOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold6665.18491
mRNA.BJAM.scaffold6666.18492ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold6666.18493ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold6666.18494ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold6667.18495TETRASPANIN
mRNA.BJAM.scaffold6669.18496
mRNA.BJAM.scaffold667.4572DUAL SPECIFICITY PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold667.4573
mRNA.BJAM.scaffold667.4574
mRNA.BJAM.scaffold667.457560S RIBOSOMAL PROTEIN L37
mRNA.BJAM.scaffold667.4576BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold667.4577POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
mRNA.BJAM.scaffold667.4578HISTONE DEACETYLASE HDAC1-RELATED
mRNA.BJAM.scaffold667.4579HISTONE DEACETYLASE HDAC1-RELATED
mRNA.BJAM.scaffold667.4580
mRNA.BJAM.scaffold667.4581MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
mRNA.BJAM.scaffold667.4582SELENOPROTEIN K
mRNA.BJAM.scaffold667.4583
mRNA.BJAM.scaffold6670.18497
mRNA.BJAM.scaffold6670.18498
mRNA.BJAM.scaffold6671.18499PIKACHURIN-LIKE PROTEIN
mRNA.BJAM.scaffold6671.18500FAT ATYPICAL CADHERIN-RELATED
mRNA.BJAM.scaffold6671.18501
mRNA.BJAM.scaffold6672.18502
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