About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

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Gene IDDescription
KAK2186901.1APOPTOSIS REGULATORY PROTEIN SIVA
KAK2186902.1CODANIN-1
KAK2186903.1-
KAK2186904.1PROSTAGLANDIN REDUCTASE
KAK2186905.1SEL-1-LIKE PROTEIN
KAK2186906.1-
KAK2186907.1PROTEIN, PUTATIVE-RELATED
KAK2186851.1GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
KAK2186852.15'-NUCLEOTIDASE
KAK2186853.1-
KAK2186854.1COILED-COIL DOMAIN-CONTAINING PROTEIN 14
KAK2186855.1INOSITOL POLYPHOSPHATE KINASE
KAK2186856.1EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1
KAK2186857.1-
KAK2186858.1HISTONE-LYSINE N-METHYLTRANSFERASE SETD2
KAK2186859.1TUMOR NECROSIS FACTOR RECEPTOR
KAK2186860.1UNCHARACTERIZED
KAK2186861.1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
KAK2186862.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
KAK2186863.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
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