About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold6295.18078
mRNA.BJAM.scaffold6295.18079
mRNA.BJAM.scaffold6295.18080
mRNA.BJAM.scaffold63.458METALLO PHOSPHOESTERASE RELATED
mRNA.BJAM.scaffold63.459ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
mRNA.BJAM.scaffold63.460ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
mRNA.BJAM.scaffold63.461TRANSLATION INITIATION FACTOR EIF3-RELATED
mRNA.BJAM.scaffold63.462
mRNA.BJAM.scaffold63.46324-DEHYDROCHOLESTEROL REDUCTASE
mRNA.BJAM.scaffold63.464
mRNA.BJAM.scaffold63.465NUCLEAR PROTEIN LOCALIZATION 4
mRNA.BJAM.scaffold63.466GLYCOSYLTRANSFERASE
mRNA.BJAM.scaffold63.467GLYCOSYLTRANSFERASE
mRNA.BJAM.scaffold63.468TETRASPANIN
mRNA.BJAM.scaffold63.469
mRNA.BJAM.scaffold63.470UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
mRNA.BJAM.scaffold63.471UBIQUITIN-ACTIVATING ENZYME E1
mRNA.BJAM.scaffold63.472TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED
mRNA.BJAM.scaffold63.473
mRNA.BJAM.scaffold63.474
mRNA.BJAM.scaffold63.475
mRNA.BJAM.scaffold6300.18081
mRNA.BJAM.scaffold6302.18082SET DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold6305.18083PROTEIN STAR
mRNA.BJAM.scaffold6305.18084
mRNA.BJAM.scaffold6306.18085VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
mRNA.BJAM.scaffold6308.18086TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold6308.18087
mRNA.BJAM.scaffold631.4380SIDESTEP PROTEIN
mRNA.BJAM.scaffold631.4381
mRNA.BJAM.scaffold6310.18088ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
mRNA.BJAM.scaffold6310.18089
mRNA.BJAM.scaffold6310.18090NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
mRNA.BJAM.scaffold6312.18091SOLUTE CARRIER FAMILY 39
mRNA.BJAM.scaffold6317.18092ZINC FINGER CCHC DOMAIN-CONTAINING
mRNA.BJAM.scaffold6318.18093
mRNA.BJAM.scaffold6319.18094
mRNA.BJAM.scaffold6319.18095SID1 TRANSMEMBRANE FAMILY MEMEBER
mRNA.BJAM.scaffold632.4382PROTEIN MIS12 HOMOLOG
mRNA.BJAM.scaffold632.4383
mRNA.BJAM.scaffold632.4384KRAB DOMAIN C2H2 ZINC FINGER
mRNA.BJAM.scaffold6320.18096
mRNA.BJAM.scaffold6320.18097
mRNA.BJAM.scaffold6320.18098
mRNA.BJAM.scaffold6320.18099MDM2-BINDING PROTEIN
mRNA.BJAM.scaffold6321.18100PATCHED-RELATED
mRNA.BJAM.scaffold6324.18102
mRNA.BJAM.scaffold6324.18103SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold6324.18104SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold6324.18105SULFOTRANSFERASE SULT
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