The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032869771.1 | LASP |
| XP_032869772.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| XP_032869773.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032869774.1 | ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED |
| XP_032869775.1 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| XP_032869776.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| XP_032869777.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032869778.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| XP_032869779.1 | PHOSPHOLIPID ACYLTRANSFERASE |
| XP_032869780.1 | PHOSPHOLIPID ACYLTRANSFERASE |
| XP_032869781.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032869782.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032869783.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032869784.1 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| XP_032869785.1 | SAPOSIN-RELATED |
| XP_032869786.1 | UPF0561 PROTEIN C2ORF68 |
| XP_032869787.1 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| XP_032869788.1 | |
| XP_032869789.1 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032869790.1 | |
| XP_032869791.1 | |
| XP_032869792.1 | FIBROBLAST GROWTH FACTOR |
| XP_032869793.1 | VESICLE-ASSOCIATED MEMBRANE PROTEIN 5 |
| XP_032869794.1 | AUTOSOMAL HIGHLY CONSERVED PROTEIN |
| XP_032869795.1 | VESICLE-ASSOCIATED MEMBRANE PROTEIN 5 |
| XP_032869796.1 | VESICLE-ASSOCIATED MEMBRANE PROTEIN 5 |
| XP_032869797.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869798.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869799.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869800.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869801.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869802.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869803.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869804.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869805.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869806.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032869807.1 | TRANSCRIPTIONAL AND IMMUNE RESPONSE REGULATOR |
| XP_032869808.1 | ADENYLYL CYCLASE-ASSOCIATED PROTEIN |
| XP_032869809.1 | LSM1 |
| XP_032869810.1 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032869811.1 | PROTEASE M14 CARBOXYPEPTIDASE |
| XP_032869812.1 | DNA POLYMERASE DELTA SUBUNIT 2 |
| XP_032869813.1 | DNA POLYMERASE DELTA SUBUNIT 2 |
| XP_032869814.1 | INDOLEAMINE 2,3-DIOXYGENASE |
| XP_032869815.1 | ADENYLYL CYCLASE-ASSOCIATED PROTEIN |
| XP_032869816.1 | SET DOMAIN PROTEINS |
| XP_032869817.1 | SET DOMAIN PROTEINS |
| XP_032869818.1 | SET DOMAIN PROTEINS |
| XP_032869819.1 | SET DOMAIN PROTEINS |
| XP_032869820.1 | SERINE/THREONINE-PROTEIN KINASE |
