About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Perciformes (Order); Cottoidei (Suborder); Liparidae (Family); Pseudoliparis (Genus); Pseudoliparis swirei (Species)

Original Name

Pseudoliparis swirei Gerringer & Linley, 2017

Key Reference Paper

1. Gerringer M E, Linley T D, Jamieson A J, et al. Pseudoliparis swirei sp. nov.: a newly-discovered hadal snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench[J]. Zootaxa, 2017, 4358(1): 161–177-161–177. (Gerringer et al., 2017)

Description

Holotype is immature. Ripe females had eggs up to 9.4 mm diameter, among the largest teleost eggs recorded, 0.4 mm smaller than the largest record. The eggs were unsorted within gonad, with the largest eggs free and interspersed within a matrix of smaller eggs. No developmental structures were visible within even the largest eggs. Two distinct size classes of eggs present with up to 23 large eggs (>5 mm) and up to 851 small eggs of less than half the diameter of the larger size class. There were rarely intermediate stages (Figure 7). Individuals with only small eggs had maximum egg sizes ranging from 0.7 to 1.4 mm. Genital papilla visible in freshly collected males, oriented anteriorly

Etymology

The Mariana Trench famously houses the ocean’s deepest point, at Challenger Deep, named for the HMS Challenger expedition which discovered the trench in 1875. Their deepest sounding of 8,184 m, then the greatest known ocean depth, was christened Swire Deep after Herbert Swire, the ship’s First Navigating Sublieutenant (Corfield 2003). We name this fish in his honor, in acknowledgment and gratitude of the crew members that have supported oceanographic research throughout history

Distribution

Known only from the Mariana Trench at capture depths from 6,898–7,966 m, individuals likely this species were recognized in video at depths 6,198–8,098 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-684Mbscaffold2019--PRJNA47284691.70 25,738/4,21944-25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka07101DYNEIN REGULATORY COMPLEX SUBUNIT 4
Tanaka07102TRANSCRIPTION FACTOR E2F
Tanaka07103SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Tanaka07104AMINO ACID TRANSPORTER
Tanaka07105ASPARTATE AMINOTRANSFERASE
Tanaka07106CALBINDIN
Tanaka07107UNCHARACTERIZED
Tanaka07108CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Tanaka07109AMINO ACID TRANSPORTER
Tanaka07110NEURITIN-RELATED
Tanaka07111THAP DOMAIN PROTEIN 11
Tanaka07112BCDNA.GH03377
Tanaka07113DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Tanaka07114GTP-BINDING PROTEIN ALPHA SUBUNIT
Tanaka07115TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN
Tanaka07116HISTONE ACETYLTRANSFERASE COMPLEX
Tanaka07117PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT
Tanaka07118-
Tanaka07119ZINC FINGER PROTEIN 200
Tanaka07120PROTEIN KINASE PKN/PRK1, EFFECTOR
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