The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032884621.1 | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT |
| XP_032884622.1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| XP_032884623.1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| XP_032884624.1 | METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
| XP_032884625.1 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
| XP_032884626.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032884627.1 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
| XP_032884628.1 | PROTEIN PATCHED |
| XP_032884629.1 | PROTEIN PATCHED |
| XP_032884630.1 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA |
| XP_032884631.1 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA |
| XP_032884632.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 19 |
| XP_032884633.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| XP_032884634.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| XP_032884635.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032884636.1 | SERINE/THREONINE-PROTEIN KINASE PLK |
| XP_032884637.1 | ANTIGEN BSP, PUTATIVE-RELATED |
| XP_032884638.1 | ANTIGEN BSP, PUTATIVE-RELATED |
| XP_032884639.1 | BESTROPHIN |
| XP_032884640.1 | 40S RIBOSOMAL PROTEIN S8 |
| XP_032884641.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032884642.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032884643.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032884644.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032884645.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032884646.1 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
| XP_032884647.1 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
| XP_032884648.1 | SELENOPROTEIN P |
| XP_032884649.1 | RAS-LIKE FAMILY MEMBER 11 |
| XP_032884650.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032884651.1 | PEPTIDASE S8 |
| XP_032884652.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884653.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884654.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884655.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884656.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884657.1 | MONOCARBOXYLATE TRANSPORTER |
| XP_032884658.1 | 24-DEHYDROCHOLESTEROL REDUCTASE |
| XP_032884659.1 | 24-DEHYDROCHOLESTEROL REDUCTASE |
| XP_032884660.1 | 24-DEHYDROCHOLESTEROL REDUCTASE |
| XP_032884661.1 | LYMPHOCYTE EXPANSION MOLECULE |
| XP_032884662.1 | GS HOMEOBOX 2 |
| XP_032884663.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| XP_032884664.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| XP_032884665.1 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
| XP_032884666.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 4 |
| XP_032884667.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032884668.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032884669.1 | TRANSMEMBRANE PROTEIN 205 |
| XP_032884670.1 | TRANSMEMBRANE PROTEIN 205 |
