About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 318 319 320 321 322 323 324 325 326 327 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG14361.1
RPACG14362.1
RPACG14363.1
RPACG14364.1
RPACG14365.1AMINO ACID TRANSPORTER
RPACG14366.1AMINO ACID TRANSPORTER
RPACG14367.1
RPACG14368.1FORMIN
RPACG14369.1EXPORTIN 4,7-RELATED
RPACG14370.1EXPORTIN 4,7-RELATED
RPACG14371.1EXPORTIN 4,7-RELATED
RPACG14372.1EXPORTIN 4,7-RELATED
RPACG14373.1
RPACG14374.1
RPACG14375.1MYOSIN LIGHT CHAIN 1, 3
RPACG14376.1
RPACG14377.1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
RPACG14377.2
RPACG14377.3
RPACG14378.1
RPACG14379.1S-ANTIGEN PROTEIN
RPACG14380.1
RPACG14381.1C10ORF188 FAMILY MEMBER
RPACG14382.1
RPACG14383.1
RPACG14384.1
RPACG14385.1
RPACG14386.1
RPACG14387.1
RPACG14388.1BETA1,3-GALACTOSYLTRANSFERASE
RPACG14389.1NG5
RPACG14390.1CONDENSIN COMPLEX SUBUNIT 3-RELATED
RPACG14391.1DUAL SPECIFICITY PROTEIN PHOSPHATASE
RPACG14392.1SULFITE REDUCTASE
RPACG14392.2
RPACG14393.1
RPACG14394.1GALACTOCEREBROSIDASE
RPACG14395.1CALCIUM BINDING PROTEIN
RPACG14396.1
RPACG14397.1TUBULIN
RPACG14398.1METHYLTRANSFERASE N6AMT1
RPACG14399.1HISTIDINE-RICH GLYCOPROTEIN
RPACG14400.1ABRAXAS FAMILY MEMBER
RPACG14401.1HEXOKINASE
RPACG14402.1
RPACG14403.1
RPACG14404.1CENTROMERE PROTEIN I
RPACG14405.1
RPACG14406.1
RPACG14407.1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
TOP