About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Perciformes (Order); Cottoidei (Suborder); Liparidae (Family); Pseudoliparis (Genus); Pseudoliparis swirei (Species)

Original Name

Pseudoliparis swirei Gerringer & Linley, 2017

Key Reference Paper

1. Gerringer M E, Linley T D, Jamieson A J, et al. Pseudoliparis swirei sp. nov.: a newly-discovered hadal snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench[J]. Zootaxa, 2017, 4358(1): 161–177-161–177. (Gerringer et al., 2017)

Description

Holotype is immature. Ripe females had eggs up to 9.4 mm diameter, among the largest teleost eggs recorded, 0.4 mm smaller than the largest record. The eggs were unsorted within gonad, with the largest eggs free and interspersed within a matrix of smaller eggs. No developmental structures were visible within even the largest eggs. Two distinct size classes of eggs present with up to 23 large eggs (>5 mm) and up to 851 small eggs of less than half the diameter of the larger size class. There were rarely intermediate stages (Figure 7). Individuals with only small eggs had maximum egg sizes ranging from 0.7 to 1.4 mm. Genital papilla visible in freshly collected males, oriented anteriorly

Etymology

The Mariana Trench famously houses the ocean’s deepest point, at Challenger Deep, named for the HMS Challenger expedition which discovered the trench in 1875. Their deepest sounding of 8,184 m, then the greatest known ocean depth, was christened Swire Deep after Herbert Swire, the ship’s First Navigating Sublieutenant (Corfield 2003). We name this fish in his honor, in acknowledgment and gratitude of the crew members that have supported oceanographic research throughout history

Distribution

Known only from the Mariana Trench at capture depths from 6,898–7,966 m, individuals likely this species were recognized in video at depths 6,198–8,098 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-684Mbscaffold2019--PRJNA47284691.70 25,738/4,21944-25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka05961PROTEIN ECT2
Tanaka05962RHO GUANINE EXCHANGE FACTOR-RELATED
Tanaka05963BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Tanaka05964REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Tanaka05965DESMOGLEIN FAMILY MEMBER
Tanaka05966LAMIN DM0-RELATED
Tanaka05967COMM DOMAIN CONTAINING PROTEIN 2
Tanaka05968TRANSPORT PROTEIN TRAPP
Tanaka05969CYSTINOSIN
Tanaka05970NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT
Tanaka0597139S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL
Tanaka05972SOLUTE CARRIER FAMILY 5
Tanaka05973BETA-1,4-GALACTOSYLTRANSFERASE
Tanaka05974DESMOGLEIN FAMILY MEMBER
Tanaka05975UNCHARACTERIZED
Tanaka05976PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Tanaka05977CADHERIN-23
Tanaka05978REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Tanaka05979DUF3504 DOMAIN-CONTAINING PROTEIN
Tanaka05980TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4
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